Publications by authors named "Ali Shakir"

Article Synopsis
  • - This study investigated how vitexin impacts sepsis-related acute lung injury, utilizing network pharmacology and various lab experiments to assess its potential in preventing cell death and regulating specific genetic pathways.
  • - The researchers created a model of acute lung injury in mice and human lung cells, discovering that vitexin effectively reduced inflammation and lung damage while enhancing cell recovery and function through multiple experimental techniques.
  • - Results revealed that vitexin lowers oxidative stress and influences epigenetic factors related to inflammation, highlighting its potential as a treatment for acute lung injury and suggesting new therapeutic targets for future research.
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Zinc aspartate and zinc citrate have been used as zinc supplements in different health conditions. Taking into consideration their anti-inflammatory, immunomodulatory, anti-oxidant and antimicrobial properties, the present study has been designed to analyse the effect of zinc aspartate and zinc citrate treatment at therapeutic dose level on disease severity index, haematological, serological, antimicrobial and radiological markers of rheumatoid arthritis in Wistar rats. Bactericidal potential of the two organic zinc compounds was analysed in vitro in clinically isolated Escherichia coli.

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United Nation Sustainable Development Goal 15.3 make a note of growing significance of management and restoration strategies for degraded land, and advocating globally for collaborative frameworks of innovative applied research and policy. Present study, quantified the impacts of the staggered contour trenching (SCT) technology in conjunction with silvi-pasture production system on regulating and provisioning ecosystem services of degraded mini-watersheds.

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The venom of the scorpion, prevalent in East Asia and Iran, has not been fully characterized. This study provides the first proteomic profile of venom to explore its potential as a medical. 2D-PAGE analysis revealed 96 protein spots with isoelectric points from 3 to 9 and molecular weights between 6.

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Orb web spiders are common and highly diversified animals found in almost all habitats. They have remarkable plasticity against biotic and abiotic factors, making them excellent indicators of environmental health. The web creation behavior of spiders is influenced by disturbances in the environment.

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Topological indices are numerical parameters that indicate the topology of graphs or hypergraphs. A hypergraph consists of a vertex set and an edge set , where each edge is a subset of with at least two elements. In this paper, our main aim is to introduce a general hypergraph structure for the prime ideal sum (PIS)- graph of a commutative ring.

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Marburg virus (MARV) is a highly contagious and virulent agent belonging to Filoviridae family. MARV causes severe hemorrhagic fever in humans and non-human primates. Owing to its highly virulent nature, preventive approaches are promising for its control.

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Objectives: The study aimed to identify a quantitative signature of circulating small non-coding RNAs (sncRNAs) as a biomarker for pulmonary tuberculosis disease (active-TB/ATB) and explore their regulatory roles in host-pathogen interactions and disease progression.

Methods: We conducted a cross-sectional study recruiting subjects diagnosed with active-TB (drug-sensitive and drug-resistant) and healthy controls. Sera samples were collected and utilized for preparing small RNA libraries.

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The present work aims to explore the new solid forms of telmisartan (TEL) with alpha-ketoglutaric acid (KGA) and glutamic acid (GA) as potential coformers using mechanochemical approach and their role in augmentation in physicochemical parameters over pure crystalline TEL. Mechanochemical synthesis was performed using 1:1 stoichiometric ratio of TEL and the selected coformers in the presence of catalytic amount of ethanol for 1 h. The ground product was characterized by PXRD, DSC, and FTIR.

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Glycine is a conditional non-essential amino acid in human and other mammals. It is abundant in the liver and is known for a wide spectrum of characteristics including the antioxidant, antiinflammatory, immunomodulatory, and cryoprotective effects. The amino acid is a naturally occurring osmolyte compatible with protein surface interactions and has been reported in literature as a potent therapeutic immuno-nutrient for liver diseases such as alcoholic liver disease.

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Rice (Oryza sativa) is one of the essential staple foods highly consumed globally, with nearly 40% to 45% of the global population estimated to consume rice. Therefore, consumable rice should have low levels of harmful elements. This study investigates fluoride (F¯) content in raw rice (uncooked rice) and evaluates Probabilistic Health Risk Assessment (PHRA) through Monte Carlo simulation (MCS) due to the consumption of F¯ enriched rice.

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Nitrate (NO-) and fluoride (F-) are two major potential contaminants found in the groundwater of Iran. These contaminants are highly dangerous to humans if consumed more than the safe limit prescribed by the WHO. Therefore, in this study, the urban and rural drinking water resources of Isfahan province (central Iran) were investigated to evaluate the quality of groundwater from the perspective of NO- and F-.

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Article Synopsis
  • Groundwater in Kabul, sourced from both shallow and deep aquifers, is facing quality deterioration due to unlicensed wells caused by rapid urbanization and population growth.
  • A multi-parameter study of hydrochemical and environmental isotopes revealed that water-rock interactions significantly influence groundwater chemistry, with distinct chemical characteristics discerned between shallow and deep aquifers.
  • The research underscores the hydraulic connections between aquifers, indicating that the shallow aquifer recharges the deep aquifer, and provides crucial insights for the sustainable management of Kabul's water resources.
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The key objective of this paper is to study the cyclic codes over mixed alphabets on the structure of FqPQ, where P=Fq[v]⟨v3-α22v⟩ and Q=Fq[u,v]⟨u2-α12,v3-α22v⟩ are nonchain finite rings and αi is in Fq/{0} for i∈{1,2}, where q=pm with m≥1 is a positive integer and is an odd prime. Moreover, with the applications, we obtain better and new quantum error-correcting (QEC) codes. For another application over the ring , we obtain several optimal codes with the help of the Gray image of cyclic codes.

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Due to rising populations and human activities, heavy metals (HM) toxicity has become a serious problem for all life forms. The present study deals with isolating and identifying lead-resistant bacteria from contaminated wastewater of tanneries effluents. Two isolated strains were identified as (ID1), and sp (ID3), and both strains resisted a 25 mM concentration of Lead nitrate (Pb (NO)).

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Unlabelled: Acute lung injury (ALI)/acute respiratory distress syndrome (ARDS) are lung complications diagnosed by impaired gaseous exchanges leading to mortality. From the diverse etiologies, sepsis is a prominent contributor to ALI/ARDS. In the present study, we retrieved sepsis-induced ARDS mRNA expression profile and identified 883 differentially expressed genes (DEGs).

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Salinity is an imbalanced concentration of mineral salts in the soil or water that causes yield loss in salt-sensitive crops. Rice plant is vulnerable to soil salinity stress at seedling and reproductive stages. Different non-coding RNAs (ncRNAs) post-transcriptionally regulate different sets of genes during different developmental stages under varying salinity tolerance levels.

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Plastic is a fundamental polymer used in routine life and disposed of in sewage. It leads to microplastic pollution in aquatic organisms, introducing it into the food chain and affecting human health. In the present study, samples were collected from sewage wastewater to isolate the bacteria that could potentially reduce plastic.

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Plastic pollution is a global issue and has become a major concern since Coronavirus disease (COVID)-19. In developing nations, landfilling and illegal waste disposal are typical ways to dispose of COVID-19-infected material. These technologies worsen plastic pollution and other human and animal health problems.

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Mining of novel scaffolds as potential DPP-IV inhibitors for future development of potential candidates as antidiabetic agents to address global issues. The identified hit from a previously reported study was taken as a lead for designing a library of analogues and screened initially based on parameters and docking score. A series of selected (2[4-(1-acetyl-5-phenyl-4,5-dihydro-1-pyrazol-3-yl)phenoxy]-1-phenylethanone derivatives were synthesized and evaluated through studies.

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Article Synopsis
  • - The study investigates the Ala54Thr polymorphism of the FABP-2 gene, which is connected to lipid metabolism, particularly focusing on its impact on triglyceride levels in hyperlipidemic Asian Indians from North India.
  • - By analyzing groups of hyperlipidemic and normolipidemic individuals, the research found no significant differences in the distribution of the Ala54Thr genotypes between the two groups, but the heterozygous genotype was linked to higher triglyceride and VLDL levels.
  • - Ultimately, the findings suggest that the heterozygous FABP-2 Ala54Thr genotype could be a contributing risk factor for hypertriglyceridemia among this population.
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Members of the HtrA family of serine proteases are known to play roles in mitochondrial homeostasis as well as in programmed cell death. Mitochondrial homeostasis and metabolism are crucial for the survival and propagation of the malaria parasite within the host. Here we have functionally characterized a Plasmodium falciparum HtrA2 (PfHtrA2) protein, which harbours trypsin-like protease activity that can be inhibited by its specific inhibitor, ucf-101.

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Diabetes mellitus is a metabolic disease largely due to lifestyle and nutritional imbalance, resulting in insulin resistance, hyperglycemia and vascular complications. Diabetic kidney disease (DKD) is a major cause of end-stage renal failure contributing to morbidity and mortality worldwide. Therapeutic options to prevent or reverse DKD progression are limited.

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Diagnosis of latent tuberculosis infection (LTBI) using biomarkers in order to identify the risk of progressing to active TB and therefore predicting a preventive therapy has been the main bottleneck in eradication of tuberculosis. We compared two assays for the diagnosis of LTBI: transcript signatures and interferon gamma release assay (IGRA), among household contacts (HHCs) in a high tuberculosis-burden population. HHCs of active TB cases were recruited for our study; these were confirmed to be clinically negative for active TB disease.

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