Publications by authors named "Ali Borhan"

Mass transfer to the reactive wall of a curved cylindrical tube is analyzed in the combined entry region where both momentum and concentration boundary layers are developing. The velocity and concentration distributions developing from uniform inlet profiles are obtained using perturbation analysis, accounting for acceleration of the inviscid flow outside the boundary layer arising from channel curvature and flow displacement. The enhancement in the average flux of the reactive species at the tube wall downstream of the inlet is determined and compared to predictions of numerical simulations.

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Granular hydrogel scaffolds (GHS) are fabricated via placing hydrogel microparticles (HMP) in close contact (packing), followed by physical and/or chemical interparticle bond formation. Gelatin methacryloyl (GelMA) GHS have recently emerged as a promising platform for biomedical applications; however, little is known about how the packing of building blocks, physically crosslinked soft GelMA HMP, affects the physical (pore microarchitecture and mechanical/rheological properties) and biological (in vitro and in vivo) attributes of GHS. Here, the GHS pore microarchitecture is engineered via the external (centrifugal) force-induced packing and deformation of GelMA HMP to regulate GHS mechanical and rheological properties, as well as biological responses in vitro and in vivo.

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The dynamic interplay between the composition of lipid membranes and the behavior of membrane-bound enzymes is critical to the understanding of cellular function and viability, and the design of membrane-based biosensing platforms. While there is a significant body of knowledge about how lipid composition and dynamics affect membrane-bound enzymes, little is known about how enzyme catalysis influences the motility and lateral transport on lipid membranes. Using enzyme-attached lipids in supported bilayers (SLBs), we provide direct evidence of catalysis-induced fluid flow that underlies the observed motility on SLBs.

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The centrifugal force in flow through a curved channel initiates a hydrodynamic instability that results in the development of Dean vortices, a pair of counter-rotating roll cells across the channel that deflect the high velocity fluid in the center toward the outer (concave) wall. When this secondary flow toward the concave (outer) wall is too strong to be dissipated by viscous effects, an additional pair of vortices emerges near the outer wall. Combining numerical simulation and dimensional analysis, we find that the critical condition for the onset of the second vortex pair depends on γ^{1/2}Dn (γ: channel aspect ratio; Dn: Dean number).

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Background: Although no authorization is available for antibiotics to treat bee diseases, some veterinary compounds are used by beekeepers, and each country sets its own thresholds. Inappropriate and excessive use of these drugs can cause allergic reactions and antibiotic resistance in humans who consume the remaining antibiotic residues in honey and its products. It is, therefore, relevant to monitor the presence of antibiotic residues in this matrix.

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Photothermal atomic force microscopy coupled with infrared spectroscopy (AFM-IR) brings significant value as a spatially resolved surface analysis technique for disordered oxide materials such as glasses, but additional development and fundamental understanding of governing principles is needed to interpret AFM-IR spectra, since the existing theory described for organic materials does not work for materials with high extinction coefficients for infrared (IR) absorption. This paper describes theoretical calculation of a transient temperature profile inside the IR-absorbing material considering IR refraction at the interface as well as IR adsorption and heat transfer inside the sample. This calculation explains the differences in peak positions and amplitudes of AFM-IR spectra from those of specular reflectance and extinction coefficient spectra.

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Significant increases in cell density and product titer have led to renewed interest in the application of depth filtration for initial clarification of cell culture fluid in antibody production. The performance of these depth filters will depend on the local pressure and velocity distribution within the filter capsule, but these are very difficult to probe experimentally, leading to challenges in both process design and scale-up. We have used a combination of carefully designed experimental studies and computational fluid dynamics (CFD) to examine these issues in both lab-scale (Supracap 50) and pilot-scale (Stax ) depth filter modules, both employing dual-layer lenticular PDH4 media containing diatomaceous earth.

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In crystalline cellulose I, all glucan chains are ordered from reducing ends to non-reducing ends. Thus, the polarity of individual chains is added forming a large dipole within the crystal. If one can engineer unidirectional alignment (parallel packing) of cellulose crystals, then it might be possible to utilize the material properties originating from polar crystalline structures.

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The Wenzel model, commonly used for predicting the equilibrium contact angle (CA) of drops which penetrate the asperities of a rough surface, does not account for the liquid volume stored in the asperities. Interestingly, many previous experimental and molecular dynamics studies have noted discrepancies between observed CAs and those predicted by the Wenzel model because of this neglected liquid volume. Here, we apply a thermodynamic model to wetting of periodically patterned surfaces to derive a volume-corrected Wenzel equation in the limit of small pattern wavelength (compared to drop size).

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Advancement in the development of metallic-based implantable micro-scale bioelectronics has been limited by low signal to noise ratios and low charge injection at electrode-tissue interfaces. Further, implantable electrodes lose their long-term functionality because of unfavorable reactive tissue responses. Thus, substantial incentive exists to produce bioelectronics capable of delivering therapeutic compounds while improving electrical performance.

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An ideal neural device enables long-term, sensitive, and selective communication with the nervous system. To accomplish this task, the material interface should mimic the biophysical and the biochemical properties of neural tissue. By contrast, microfabricated neural probes utilize hard metallic conductors, which hinder their long-term performance because these materials are not intrinsically similar to soft neural tissue.

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We report an autonomous oscillatory micromotor system in which active colloidal particles form clusters, the size of which changes periodically. The system consists of an aqueous suspension of silver orthophosphate microparticles under UV illumination, in the presence of varying concentrations of hydrogen peroxide. The colloid particles first attract each other to form clusters.

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Wetting of solid surfaces is important for many potential applications, including the design of low-drag and antifouling/self-cleaning surfaces, and it is usually quantified by the contact angle and by contact angle hysteresis. Both the chemistry and the physical patterning of the surface are known to affect the contact angle. In studying the wetting of such surfaces, most models focus on the small Bond number (Bo) limit in which the effect of gravity is negligible, which simplifies free energy calculations.

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Superhydrophobic surfaces often incorporate roughness on both micron and nanometer length scales, although a satisfactory understanding of the role of this hierarchical roughness in causing superhydrophobicity remains elusive. We present a two-dimensional thermodynamic model to describe wetting on hierarchically grooved surfaces by droplets for which the influence of gravity is negligible. By creating wetting phase diagrams for droplets on surfaces with both single-scale and hierarchical roughness, we find that hierarchical roughness leads to greatly expanded superhydrophobic domains in phase space over those for a single scale of roughness.

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The wetting configuration of a liquid droplet on a rough or physically patterned surface is typically characterized by either the Cassie wetting mode, in which the droplet resides on top of the roughness, or the Wenzel mode, in which the droplet penetrates into the roughness. For a fixed surface topology and droplet size, one of these modes corresponds to the global free-energy minimum. However, the other state is often metastable and long-lived due to a free-energy barrier that hinders the transition between the two wetting states.

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Locomotion of microorganisms plays a vital role in most of their biological processes. In many of these processes, microorganisms are exposed to complex fluids while swimming in confined domains, such as spermatozoa in mucus of mammalian reproduction tracts or bacteria in extracellular polymeric matrices during biofilm formation. Thus, it is important to understand the kinematics of propulsion in a viscoelastic fluid near a no-slip boundary.

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We describe an efficient and parsimonious matrix-based theory for studying the ensemble behavior of self-propellers and active swimmers, such as nanomotors or motile bacteria, that are typically studied by differential-equation-based Langevin or Fokker-Planck formalisms. The kinematic effects for elementary processes of motion are incorporated into a matrix, called the "kinematrix," from which we immediately obtain correlators and the mean and variance of angular and position variables (and thus effective diffusivity) by simple matrix algebra. The kinematrix formalism enables us recast the behaviors of a diverse range of self-propellers into a unified form, revealing universalities in their ensemble behavior in terms of new emergent time scales.

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Nanomotors convert chemical energy into mechanical motion. For a given motor type, the underlying chemical reaction that enables motility is typically well known, but the detailed, quantitative mechanism by which this reaction breaks symmetry and converts chemical energy to mechanical motion is often less clear, since it is difficult experimentally to measure important parameters such as the spatial distribution of chemical species around the nanorotor during operation. Without this information on how motor geometry affects motor function, it is difficult to control and optimize nanomotor behavior.

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We used molecular dynamics (MD) simulations to study the wetting of Lennard-Jones cylindrical droplets on surfaces patterned with grooves. By scaling the surface topography parameters with the droplet size, we find that the preferred wetting modes and contact angles become independent of the droplet size. This result is in agreement with a mathematical model for the droplet free energy at small Bond numbers for which the effects of gravity are negligible.

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This paper describes microencapsulation of antitumor agent 1,3-bis(2-chloroethyl)-1-nitrosourea (BCNU, Carmustine) into biodegradable polymer poly(lactic-co-glycolic) acid (PLGA) using an electrojetting technique. The resulting BCNU-loaded PLGA microcapsules have significantly higher drug encapsulation efficiency, more tunable drug loading capacity, and (3) narrower size distribution than those generated using other encapsulation methods.

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Neither a purely deterministic rotary nanomotor nor a purely orientational diffuser exhibits long-term translational motion, but coupling rotation to orientational diffusion yields translational diffusion. We demonstrate that this effective translational diffusion can easily dominate the ordinary thermal translational diffusion for experimentally relevant nanomotors, and that this effective diffusion is chiral. Unpowered chiral particles do not exhibit chiral diffusion, but a nanorotor has both handedness and an instantaneous direction of powered motion, thus-unlike an unpowered particle-its diffusional motion can distinguish left from right.

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We present a theoretical model for predicting equilibrium wetting configurations of two-dimensional droplets on periodically grooved hydrophobic surfaces. The main advantage of our model is that it accounts for pinning/depinning of the contact line at step edges, a feature that is not captured by the Cassie and Wenzel models. We also account for the effects of gravity (via the Bond number) on various wetting configurations that can occur.

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Hydrogenated amorphous silicon (a-Si:H) is one of the most technologically important semiconductors. The challenge in producing it from SiH(4) precursor is to overcome a significant kinetic barrier to decomposition at a low enough temperature to allow for hydrogen incorporation into a deposited film. The use of high precursor concentrations is one possible means to increase reaction rates at low enough temperatures, but in conventional reactors such an approach produces large numbers of homogeneously nucleated particles in the gas phase, rather than the desired heterogeneous deposition on a surface.

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We derive coarse-grained potentials for the interaction of a fluid atom with a solid substrate patterned with cylindrical or rectangular pillars, as well as with rectangular grooves. These potentials rely on the assumption of pairwise Lennard-Jones (LJ) (12-6) interactions of a fluid atom with a surface that has a uniform density of solid atoms. In the limit of a flat, semi-infinite surface, this potential becomes the LJ 9-3 potential.

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