In Search of a Target Gene for a Desirable Phenotype in Aquaculture: Genome Editing of Cyprinidae and Salmonidae Species.

Aquaculture supplies the world food market with a significant amount of valuable protein. Highly productive aquaculture fishes can be derived by utilizing genome-editing methods, and the main problem is to choose a target gene to obtain the desirable phenotype. This paper presents a review of the studies of genome editing for genes controlling body development, growth, pigmentation and sex determination in five key aquaculture Salmonidae and Cyprinidae species, such as rainbow trout (), Atlantic salmon (), common carp (), goldfish (), Gibel carp () and the model fish zebrafish ().

Fishing for oil and meat drives irreversible defaunation of deepwater sharks and rays.

The deep ocean is the last natural biodiversity refuge from the reach of human activities. Deepwater sharks and rays are among the most sensitive marine vertebrates to overexploitation. One-third of threatened deepwater sharks are targeted, and half the species targeted for the international liver-oil trade are threatened with extinction.

Measurements of variable capacitance using single port radio frequency reflectometry.

A radio frequency (RF) reflectometry technique is presented to measure device capacitances using a probe station. This technique is used to characterize micro-electromechanical system (MEMS) variable capacitor devices that can be connected to create pull-up and pull-down networks used in digital gates for reversible computing. Adiabatic reversible computing is a promising approach to energy-efficient computing that can dramatically reduce heat dissipation by switching circuits at speeds below their RC time constants, introducing a trade-off between energy and speed.

The Aleutians and Beyond: Distribution, Size Composition, and Catch Dynamics of the Aleutian Skate across the North Pacific.

The results of long-term (1948-2021) studies on the spatial and vertical distribution, dynamics of abundance, and size composition of the Aleutian skate in the North Pacific Ocean are presented. Maximum densities of this species were characteristic of the eastern Bering Sea slope, off the central Aleutian Islands, consisting of the Pacific waters off southeastern Kamchatka and the northern Kurils, and northeastern Sakhalin. This species was most abundant at depths of 100-600 m; in the cold months, migrates to greater depths for over-wintering, and in warm months it feeds at shallower depths.

Long-Term Changes in the Distribution and Abundance of Nine Deep-Water Skates (Arhynchobatidae: Rajiformes: Chondrichthyes) in the Northwestern Pacific.

Based on the analysis of long-term data from bottom trawl surveys (1977-2021), changes in the spatial distribution, position of the boundaries of the ranges and the catch rates of the nine most common deep-sea skates of the genus in the Russian waters of the Northwestern Pacific (, , , , , , , and ) are considered. During the surveyed period, significant changes in the spatial distribution were observed, which are probably due to both subjective reasons (changes in the number of trawling stations, surveyed depths, etc.) and climatic changes.

Genomic Signatures of Freshwater Adaptation in Pacific Herring ().

Pacific herring () is an essential target of commercial fishing in the North Pacific Ocean. Previous studies have suggested the existence of marine and lake ecological forms of this species within its range. The lake ecological form of herring has a shortened life cycle, spending the winter and spawning in brackish waters near the shoreline without long migrations for feeding; it also has a relatively smaller body size than the marine form.

Gate reflectometry of single-electron box arrays using calibrated low temperature matching networks.

Sensitive dispersive readouts of single-electron devices ("gate reflectometry") rely on one-port radio-frequency (RF) reflectometry to read out the state of the sensor. A standard practice in reflectometry measurements is to design an impedance transformer to match the impedance of the load to the characteristic impedance of the transmission line and thus obtain the best sensitivity and signal-to-noise ratio. This is particularly important for measuring large impedances, typical for dispersive readouts of single-electron devices because even a small mismatch will cause a strong signal degradation.

Freshwater and brackish water fishes of Sakhalin Island (Russia) in inland and coastal waters: an annotated checklist with taxonomic comments.

Based on a critical analysis of scientific publications for the last 200 years and on the collected specimens, a complete annotated list of both typical freshwater ichthyofauna of Sakhalin Island, with the inclusion of marine species that can be found in brackish coastal waters, is reported for the first time. The annotated list includes 226 species classified in three classes, 26 orders, 68 families, 29 subfamilies, and 148 genera. For 160 species, information is provided on collection samples deposited in various museums around the world, 36 of which are type specimens.

Nano-photoluminescence of natural anyon molecules and topological quantum computation.

The proposal of fault-tolerant quantum computations, which promise to dramatically improve the operation of quantum computers and to accelerate the development of the compact hardware for them, is based on topological quantum field theories, which rely on the existence in Nature of physical systems described by a Lagrangian containing a non-Abelian (NA) topological term. These are solid-state systems having two-dimensional electrons, which are coupled to magnetic-flux-quanta vortexes, forming complex particles, known as anyons. Topological quantum computing (TQC) operations thus represent a physical realization of the mathematical operations involving NA representations of a braid group B, generated by a set of n localized anyons, which can be braided and fused using a "tweezer" and controlled by a detector.

Efficient electromagnetic transducers for spin-wave devices.

This paper presents a system-level efficiency analysis, a rapid design methodology, and a numerical demonstration of efficient sub-micron, spin-wave transducers in a microwave system. Applications such as Boolean spintronics, analog spin-wave-computing, and magnetic microwave circuits are expected to benefit from this analysis and design approach. These applications have the potential to provide a low-power, magnetic paradigm alternative to modern electronic systems, but they have been stymied by a limited understanding of the microwave, system-level design for spin-wave circuits.

Anchoring PQQ-Glucose Dehydrogenase with Electropolymerized Azines for the Most Efficient Bioelectrocatalysis.

Catalytic current of pyrroloquinoline quinone (PQQ)-glucose dehydrogenase (PQQ-GDH) immobilized over electropolymerized methylene green (MG) is increased only five times after the addition of the freely diffusing mediator. This value, being an efficiency criterion for bioelectrocatalysis, is several (three to six) times lower than that for the best reagentless glucose electrodes reported for this enzyme. Thermodynamics of the polyMG|PQQ-GDH electrode is determined by the enzyme-catalyzed reaction pointing to the direct bioelectrocatalysis.

Marine seabed litter in Siberian Arctic: A first attempt to assess.

The pollution of the Siberian Arctic seas bottom by anthropogenic debris is assessed for the first time based on the results of bottom trawl surveys conducted in the Chukchi, East Siberian, Laptev, and Kara seas in 2019. In the East Siberian Sea and the Laptev Sea, no seabed litter was detected. The debris on bottom and near bottom was found in the Kara and Chukchi seas only.

Into the Deep: New Data on the Lipid and Fatty Acid Profile of Redfish Inhabiting Different Depths in the Irminger Sea.

New data on lipid and fatty acid profiles are presented, and the dynamics of the studied components in muscles in the males and females of the beaked redfish, , in the depth gradient of the Irminger Sea (North Atlantic) is discussed. The contents of the total lipids (TLs), total phospholipids (PLs), monoacylglycerols (MAGs), diacylglycerols (DAGs), triacylglycerols (TAGs), cholesterol (Chol), Chol esters, non-esterified fatty acids (NEFAs), and wax esters were determined by HPTLC; the phosphatidylserine (PS), phosphatidylethanolamine (PE), phosphatidylinositol (PI), phosphatidylcholine (PC), and lysophosphatidylcholine (LPC) were determined by HPLC; and fatty acids of total lipids were determined using GC. The Chol esters prevailed in muscles over the storage TAGs, and the wax ester content was high, which is a characteristic trait of vertically migrating species.

Bathyraja (Arctoraja) sexoculata sp. nov., a new softnose skate (Rajiformes: Arhynchobatidae) from Simushir Island, Kuril Islands (western North Pacific), with special reference to geographic variations in Bathyraja (Arctoraja) smirnovi.

A new species of softnose skate (Arhynchobatidae), Bathyraja sexoculata Misawa, Orlov, Orlova, Gordeev and Ishihara is described on the basis of five specimens collected from off the east coast of Simushir Island, Kuril Islands, located in the western North Pacific. The specimens conformed to the genus Bathyraja by having the anteriormost pectoral-fin skeleton almost reaching the snout tip, and a slender unsegmented rostral cartilage. Within Bathyraja, the new species belongs to the subgenus Arctoraja (currently with four valid species) due to the relatively short tail (79-86% of disc width), high count of predorsal caudal vertebrae (more than 86), and large strong nuchal and scapular thorns.

Nanoantenna-based ultrafast thermoelectric long-wave infrared detectors.

We investigate the generation of electrical signals by suspended thermoelectrically coupled nanoantennas (TECNAs) above a quasi-spherical reflector cavity in response to rapidly changing long-wave infrared radiation. These sensors use a resonant nanoantenna to couple the IR energy to a nanoscale thermocouple. They are positioned over a cavity, etched into the Si substrate, that provides thermal isolation and is designed as an optical element to focus the IR radiation to the antenna.

Tiny but Fatty: Lipids and Fatty Acids in the Daubed Shanny (), a Small Fish in Svalbard Waters.

The seasonal dynamic of lipids and their fatty acid constituents in the lipid sac and muscles of pelagic postlarval , an ecologically important fish species in the Arctic food nets, in Kongsfjord, Svalbard waters was studied. The determination of the qualitative and quantitative content of the total lipids (TLs), total phospholipids (PLs), triacylglycerols (TAGs), cholesterol (Chol), cholesterol esters (Chol esters) and wax esters was analyzed by TLC, the phosphatidylserine (PS), phosphatidylethanolamine (PE), phosphatidylinositol (PI), phosphatidylcholine (PC), lysophosphatidylcholine (LPC) and sphingomyelin (SM) were determined by HPLC, and fatty acids of total lipids using GC. The lipid sac is a system of cavities filled with lipids, and it is not directly connected to organs of the digestive system.

Cavity-Backed Antenna-Coupled Nanothermocouples.

This paper reports a two-orders-of-magnitude improvement in the sensitivity of antenna-coupled nanothermocouple (ACNTC) infrared detectors. The electrical signal generated by on-chip ACNTCs results from the temperature difference between a resonant antenna locally heated by infrared radiation and the substrate. A cavity etched under the antenna provides two benefits.

Parasites of the Blue Antimora, Antimora rostrata and Slender Codling, Halargyreus johnsonii (Gadiformes: Moridae), in the Northwestern Atlantic.

Purpose: The blue antimora, Antimora rostrata and slender codling, Halargyreus johnsonii (Gadoformes: Moridae) are common representatives of deep-water marine demersal fish fauna. This paper focuses on infections in blue antimora caught in the northwestern Atlantic region, but also reports observations on the parasites of slender codling obtained from a limited number of specimens from the same location.

Methods: Standard methods of parasitological examination, fixation and staining were used.

Species richness and taxonomic composition of trawl macrofauna of the North Pacific and its adjacent seas.

A checklist is presented of animal species obtained in 68,903 trawl tows during 459 research surveys performed by the Pacific Research Fisheries Center (TINRO-Center) over an area measuring nearly 25 million km in the Chukchi and Bering seas, Sea of Okhotsk, Sea of Japan and North Pacific Ocean in 1977-2014 at depths of 5 to 2,200 m. The checklist comprises 949 fish species, 588 invertebrate species, and four cyclostome species (some specimens were identified only to genus or family level). For each species details are given on the type of trawl (benthic and/or pelagic) and basins where the species was found.

Microsatellite loci obtained by next generation sequencing on the sablefish (Anoplopoma fimbria).

Eleven microsatellite loci were developed and characterized for the sablefish, Anoplopoma fimbria. The markers were identified from sequences obtained by next generation sequencing. Thirty samples from Aleutians Islands were genotyped.

Single electron transistors with hydrogen treatment of ALD SiO in nanoscale metal-insulator-metal tunnel junctions.

Over the past five years, fabrication of metal-insulator-metal (MIM) single electron transistors (SET) featuring atomic layer deposition (ALD) of ultrathin tunnel barrier dielectrics (SiO, AlO) has been reported. However, the performance of fabricated devices was significantly compromised by the presence of native metal oxide and problems associated with the nucleation of ALD dielectrics on metal substrates. To overcome the difficulty of dielectric ALD nucleation on metal substrates, we recently developed a fabrication technique in which the native metal oxide naturally forming in the presence of the ALD oxidant precursor is first used to promote the nucleation of ALD dielectrics, and then is chemically reduced by forming gas anneal (FGA) at temperatures near 400 °C.

Level Spectrum and Charge Relaxation in a Silicon Double Quantum Dot Probed by Dual-Gate Reflectometry.

We report on dual-gate reflectometry in a metal-oxide-semiconductor double-gate silicon transistor operating at low temperature as a double quantum dot device. The reflectometry setup consists of two radio frequency resonators respectively connected to the two gate electrodes. By simultaneously measuring their dispersive responses, we obtain the complete charge stability diagram of the device.

Magnetic isotope and magnetic field effects on the DNA synthesis.

Magnetic isotope and magnetic field effects on the rate of DNA synthesis catalysed by polymerases β with isotopic ions (24)Mg(2+), (25)Mg(2+) and (26)Mg(2+) in the catalytic sites were detected. No difference in enzymatic activity was found between polymerases β carrying (24)Mg(2+) and (26)Mg(2+) ions with spinless, non-magnetic nuclei (24)Mg and (26)Mg. However, (25)Mg(2+) ions with magnetic nucleus (25)Mg were shown to suppress enzymatic activity by two to three times with respect to the enzymatic activity of polymerases β with (24)Mg(2+) and (26)Mg(2+) ions.

Molecular quantum cellular automata cells. Electric field driven switching of a silicon surface bound array of vertically oriented two-dot molecular quantum cellular automata.

The amine functionality of the linker on the dinuclear complex [trans-Ru(dppm)(2)(Ctbd1;CFc)(NCCH(2)CH(2)NH(2))][PF(6)] reacts with Si-Cl bonds of a chlorinated, highly B doped Si (111) surface to yield Si-N surface-complex bonds. The surface bound complex is constrained to a near vertical orientation by the chain length of the linker as confirmed by variable angle XPS. Oxidation of the dinuclear complex with ferrocenium ion or electrochemically generates a stable, biased Fe(III)-Ru(II) mixed-valence complex on the surface.

A two-stage shift register for clocked Quantum-Dot Cellular Automata.

Quantum-Dot Cellular Automata (QCA) is a computational scheme utilizing the position of interacting single electrons within arrays of quantum dots ("cells") to encode and process binary information. Clocked QCA architectures can provide power gain, logic level restoration, and memory features. Using arrays of micron-sized metal dots, we experimentally demonstrate operation of a QCA latch-inverter and a two-stage shift register.