Annealing approach to root finding.

The Newton-Raphson method is a fundamental root-finding technique with numerous applications in physics. In this study, we propose a parameterized variant of the Newton-Raphson method, inspired by principles from physics. Through analytical and empirical validation, we demonstrate that this approach offers increased robustness and faster convergence during root-finding iterations.

Annealing approach to root-finding.

The Newton-Raphson method is a fundamental root-finding technique with numerous applications in physics. In this study, we propose a parameterized variant of the Newton-Raphson method, inspired by principles from physics. Through analytical and empirical validation, we demonstrate that this novel approach offers increased robustness and faster convergence during root-finding iterations.

Deep learning-based analysis of basins of attraction.

This research addresses the challenge of characterizing the complexity and unpredictability of basins within various dynamical systems. The main focus is on demonstrating the efficiency of convolutional neural networks (CNNs) in this field. Conventional methods become computationally demanding when analyzing multiple basins of attraction across different parameters of dynamical systems.

Planetary influences on the solar cycle: A nonlinear dynamics approach.

We explore the effect of some simple perturbations on three nonlinear models proposed to describe large-scale solar behavior via the solar dynamo theory: the Lorenz and Rikitake systems and a Van der Pol-Duffing oscillator. Planetary magnetic fields affecting the solar dynamo activity have been simulated by using harmonic perturbations. These perturbations introduce cycle intermittency and amplitude irregularities revealed by the frequency spectra of the nonlinear signals.

Framework for global stability analysis of dynamical systems.

Dynamical systems that are used to model power grids, the brain, and other physical systems can exhibit coexisting stable states known as attractors. A powerful tool to understand such systems, as well as to better predict when they may "tip" from one stable state to the other, is global stability analysis. It involves identifying the initial conditions that converge to each attractor, known as the basins of attraction, measuring the relative volume of these basins in state space, and quantifying how these fractions change as a system parameter evolves.

Effortless estimation of basins of attraction.

We present a fully automated method that identifies attractors and their basins of attraction without approximations of the dynamics. The method works by defining a finite state machine on top of the dynamical system flow. The input to the method is a dynamical system evolution rule and a grid that partitions the state space.

Ascertaining when a basin is Wada: the merging method.

Trying to imagine three regions separated by a unique boundary seems a difficult task. However, this is exactly what happens in many dynamical systems showing Wada basins. Here, we present a new perspective on the Wada property: A Wada boundary is the only one that remains unaltered under the action of merging the basins.

A new method to reduce the number of time delays in a network.

Time delays may cause dramatic changes to the dynamics of interacting oscillators. Coupled networks of interacting dynamical systems can have unexpected behaviours when the signal between the vertices are time delayed. It has been shown for a very general class of systems that the time delays can be rearranged as long as the total time delay over the constitutive loops of the network is conserved.

Basin entropy: a new tool to analyze uncertainty in dynamical systems.

In nonlinear dynamics, basins of attraction link a given set of initial conditions to its corresponding final states. This notion appears in a broad range of applications where several outcomes are possible, which is a common situation in neuroscience, economy, astronomy, ecology and many other disciplines. Depending on the nature of the basins, prediction can be difficult even in systems that evolve under deterministic rules.

Testing for Basins of Wada.

Nonlinear systems often give rise to fractal boundaries in phase space, hindering predictability. When a single boundary separates three or more different basins of attraction, we say that the set of basins has the Wada property and initial conditions near that boundary are even more unpredictable. Many physical systems of interest with this topological property appear in the literature.

Cyclic motifs as the governing topological factor in time-delayed oscillator networks.

We identify the relative amount of short cyclic motifs as an important topological factor in networks of time-delayed Kuramoto oscillators. The patterns emerging from the cyclic motifs are most clearly distinguishable in the average frequency and the momentary frequency dispersion as a function of the time delay. In particular, the common distinction between bidirectional and unidirectional couplings is shown to have a decisive effect on the network dynamics.

Control of collective network chaos.

Under certain conditions, the collective behavior of a large globally-coupled heterogeneous network of coupled oscillators, as quantified by the macroscopic mean field or order parameter, can exhibit low-dimensional chaotic behavior. Recent advances describe how a small set of "reduced" ordinary differential equations can be derived that captures this mean field behavior. Here, we show that chaos control algorithms designed using the reduced equations can be successfully applied to imperfect realizations of the full network.

Frequency dispersion in the time-delayed Kuramoto model.

We study the synchronization and frequency distribution in networks of time-delayed Kuramoto oscillators with identical natural frequency. It is found that a pronounced frequency dispersion occurs in networks with nonidentical degree distributions. The deviation of the average network frequency from its natural frequency, induced by the time delay, is identified as a necessary component for this phenomenon.

Entraining synthetic genetic oscillators.

We propose a new approach for synchronizing a population of synthetic genetic oscillators, which consists in the entrainment of a colony of repressilators by external modulation. We present a model where the repressilator dynamics is affected by periodic changes in temperature. We introduce an additional plasmid in the bacteria in order to correlate the temperature variations with the enhancement of the transcription rate of a certain gene.

Isochronous synchronization in mutually coupled chaotic circuits.

This paper examines the robustness of isochronous synchronization in simple arrays of bidirectionally coupled systems. First, the achronal synchronization of two mutually chaotic circuits, which are coupled with delay, is analyzed. Next, a third chaotic circuit acting as a relay between the previous two circuits is introduced.

Synchronization of electronic genetic networks.

We describe a simple analog electronic circuit that mimics the behavior of a well-known synthetic gene oscillator, the repressilator, which represents a set of three genes repressing one another. Synchronization of a population of such units is thoroughly studied, with the aim to compare the role of global coupling with that of global forcing on the population. Our results show that coupling is much more efficient than forcing in leading the gene population to synchronized oscillations.