Quantifying growth: A mathematical model based on acetate concentration as an oxidizing substrate.

We developed a mathematical model to simulate dynamics associated with the proliferation of Geobacter and ultimately optimize cellular operation by analyzing the interaction of its components. The model comprises two segments: an initial part comprising a logistic form and a subsequent segment that incorporates acetate oxidation as a saturation term for the microbial nutrient medium. Given that four parameters can be obtained by minimizing the square root of the mean square error between experimental Geobacter growth and the mathematical model, the model underscores the importance of incorporating nonlinear terms.

Topology switching during window thresholding fMRI-based functional networks of patients with major depressive disorder: Consensus network approach.

We present a novel method for analyzing brain functional networks using functional magnetic resonance imaging data, which involves utilizing consensus networks. In this study, we compare our approach to a standard group-based method for patients diagnosed with major depressive disorder (MDD) and a healthy control group, taking into account different levels of connectivity. Our findings demonstrate that the consensus network approach uncovers distinct characteristics in network measures and degree distributions when considering connection strengths.

Living-Neuron-Based Autogenerator.

We present a novel closed-loop system designed to integrate biological and artificial neurons of the oscillatory type into a unified circuit. The system comprises an electronic circuit based on the FitzHugh-Nagumo model, which provides stimulation to living neurons in acute hippocampal mouse brain slices. The local field potentials generated by the living neurons trigger a transition in the FitzHugh-Nagumo circuit from an excitable state to an oscillatory mode, and in turn, the spikes produced by the electronic circuit synchronize with the living-neuron spikes.

Monitoring the Cortical Activity of Children and Adults during Cognitive Task Completion.

In this paper, we used an EEG system to monitor and analyze the cortical activity of children and adults at a sensor level during cognitive tasks in the form of a Schulte table. This complex cognitive task simultaneously involves several cognitive processes and systems: visual search, working memory, and mental arithmetic. We revealed that adults found numbers on average two times faster than children in the beginning.

Stochastic Memristive Interface for Neural Signal Processing.

We propose a memristive interface consisting of two FitzHugh-Nagumo electronic neurons connected via a metal-oxide (Au/Zr/ZrO(Y)/TiN/Ti) memristive synaptic device. We create a hardware-software complex based on a commercial data acquisition system, which records a signal generated by a presynaptic electronic neuron and transmits it to a postsynaptic neuron through the memristive device. We demonstrate, numerically and experimentally, complex dynamics, including chaos and different types of neural synchronization.

Sensor-Level Wavelet Analysis Reveals EEG Biomarkers of Perceptual Decision-Making.

Perceptual decision-making requires transforming sensory information into decisions. An ambiguity of sensory input affects perceptual decisions inducing specific time-frequency patterns on EEG (electroencephalogram) signals. This paper uses a wavelet-based method to analyze how ambiguity affects EEG features during a perceptual decision-making task.

Voluntary and Involuntary Attention in Bistable Visual Perception: A MEG Study.

In this study, voluntary and involuntary visual attention focused on different interpretations of a bistable image, were investigated using magnetoencephalography (MEG). A Necker cube with sinusoidally modulated pixels' intensity in the front and rear faces with frequencies 6.67 Hz (60/9) and 8.

Jump intermittency as a second type of transition to and from generalized synchronization.

The transition from asynchronous dynamics to generalized chaotic synchronization and then to completely synchronous dynamics is known to be accompanied by on-off intermittency. We show that there is another (second) type of the transition called jump intermittency which occurs near the boundary of generalized synchronization in chaotic systems with complex two-sheeted attractors. Although this transient behavior also exhibits intermittent dynamics, it differs sufficiently from on-off intermittency supposed hitherto to be the only type of motion corresponding to the transition to generalized synchronization.

Dissociating Cognitive Processes During Ambiguous Information Processing in Perceptual Decision-Making.

Decision-making requires the accumulation of sensory evidence. However, in everyday life, sensory information is often ambiguous and contains decision-irrelevant features. This means that the brain must disambiguate sensory input and extract decision-relevant features.

Functional Near-Infrared Spectroscopy for the Classification of Motor-Related Brain Activity on the Sensor-Level.

Sensor-level human brain activity is studied during real and imaginary motor execution using functional near-infrared spectroscopy (fNIRS). Blood oxygenation and deoxygenation spatial dynamics exhibit pronounced hemispheric lateralization when performing motor tasks with the left and right hands. This fact allowed us to reveal biomarkers of hemodynamical response of the motor cortex on the motor execution, and use them for designing a sensing method for classification of the type of movement.

Coherent resonance in the distributed cortical network during sensory information processing.

Neuronal brain network is a distributed computing system, whose architecture is dynamically adjusted to provide optimal performance of sensory processing. A small amount of visual information needed effortlessly be processed, activates neural activity in occipital and parietal areas. Conversely, a visual task which requires sustained attention to process a large amount of sensory information, involves a set of long-distance connections between parietal and frontal areas coordinating the activity of these distant brain regions.

Neural Interactions in a Spatially-Distributed Cortical Network During Perceptual Decision-Making.

Behavioral experiments evidence that attention is not maintained at a constant level, but fluctuates with time. Recent studies associate such fluctuations with dynamics of attention-related cortical networks, however the exact mechanism remains unclear. To address this issue, we consider functional neuronal interactions during the accomplishment of a reaction time (RT) task which requires sustained attention.

Percept-related EEG classification using machine learning approach and features of functional brain connectivity.

Machine learning is a promising approach for electroencephalographic (EEG) trials classification. Its efficiency is largely determined by the feature extraction and selection techniques reducing the dimensionality of input data. Dimensionality reduction is usually implemented via the mathematical approaches (e.

Visual and kinesthetic modes affect motor imagery classification in untrained subjects.

The understanding of neurophysiological mechanisms responsible for motor imagery (MI) is essential for the development of brain-computer interfaces (BCI) and bioprosthetics. Our magnetoencephalographic (MEG) experiments with voluntary participants confirm the existence of two types of motor imagery, kinesthetic imagery (KI) and visual imagery (VI), distinguished by activation and inhibition of different brain areas in motor-related α- and β-frequency regions. Although the brain activity corresponding to MI is usually observed in specially trained subjects or athletes, we show that it is also possible to identify particular features of MI in untrained subjects.

Statistical Properties and Predictability of Extreme Epileptic Events.

The use of extreme events theory for the analysis of spontaneous epileptic brain activity is a relevant multidisciplinary problem. It allows deeper understanding of pathological brain functioning and unraveling mechanisms underlying the epileptic seizure emergence along with its predictability. The latter is a desired goal in epileptology which might open the way for new therapies to control and prevent epileptic attacks.

Increasing Human Performance by Sharing Cognitive Load Using Brain-to-Brain Interface.

Brain-computer interfaces (BCIs) attract a lot of attention because of their ability to improve the brain's efficiency in performing complex tasks using a computer. Furthermore, BCIs can increase human's performance not only due to human-machine interactions, but also thanks to an optimal distribution of cognitive load among all members of a group working on a common task, i.e.

Human personality reflects spatio-temporal and time-frequency EEG structure.

The reliable and objective assessment of intelligence and personality has been a topic of increasing interest of contemporary neuroscience and psychology. It is known that intelligence can be measured by estimating the mental speed or velocity of information processing. This is usually measured as a reaction time during elementary cognitive task processing, while personality is often assessed by means of questionnaires.

Optoelectronic system for brain neuronal network stimulation.

We propose an optoelectronic system for stimulation of living neurons. The system consists of an electronic circuit based on the FitzHugh-Nagumo model, an optical fiber, and a photoelectrical converter. We used this system for electrical stimulation of hippocampal living neurons in acute hippocampal brain slices (350-μm thick) obtained from a 20-28 days old C57BL/6 mouse or a Wistar rat.

Artificial neural network detects human uncertainty.

Artificial neural networks (ANNs) are known to be a powerful tool for data analysis. They are used in social science, robotics, and neurophysiology for solving tasks of classification, forecasting, pattern recognition, etc. In neuroscience, ANNs allow the recognition of specific forms of brain activity from multichannel EEG or MEG data.

Multistability and tipping: From mathematics and physics to climate and brain-Minireview and preface to the focus issue.

Multistability refers to the coexistence of different stable states in nonlinear dynamical systems. This phenomenon has been observed in laboratory experiments and in nature. In this introduction, we briefly introduce the classes of dynamical systems in which this phenomenon has been found and discuss the extension to new system classes.

Visual perception affected by motivation and alertness controlled by a noninvasive brain-computer interface.

The influence of motivation and alertness on brain activity associated with visual perception was studied experimentally using the Necker cube, which ambiguity was controlled by the contrast of its ribs. The wavelet analysis of recorded multichannel electroencephalograms (EEG) allowed us to distinguish two different scenarios while the brain processed the ambiguous stimulus. The first scenario is characterized by a particular destruction of alpha rhythm (8-12 Hz) with a simultaneous increase in beta-wave activity (20-30 Hz), whereas in the second scenario, the beta rhythm is not well pronounced while the alpha-wave energy remains unchanged.

Classifying the Perceptual Interpretations of a Bistable Image Using EEG and Artificial Neural Networks.

In order to classify different human brain states related to visual perception of ambiguous images, we use an artificial neural network (ANN) to analyze multichannel EEG. The classifier built on the basis of a multilayer perceptron achieves up to 95% accuracy in classifying EEG patterns corresponding to two different interpretations of the Necker cube. The important feature of our classifier is that trained on one subject it can be used for the classification of EEG traces of other subjects.