Publications by authors named "Alex Von Kriegsheim"

Hypochlorous acid (HOCl), made by neutrophil-derived myeloperoxidase, has been suggested to inhibit platelets, however, the mechanisms involved have not been described. Here we confirm that HOCl exposure changes platelet morphology and inhibits platelet spreading and aggregation. HOCl effects could be reversed by glutathione suggesting a role for cysteine oxidation.

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Background: Epidemiology links noise to increased risk of metabolic diseases like diabetes and obesity. Translational studies in humans and experimental animals showed that noise causes reactive oxygen species (ROS)-mediated cardiovascular damage. The interaction between noise and diabetes, specifically potential additive adverse effects, remains to be determined.

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Inflammatory Bowel Disease-associated colorectal cancer (IBD-CRC) is a known and serious complication of Inflammatory Bowel Disease (IBD) affecting the colon. However, relatively little is known about the pathogenesis of IBD-associated colorectal cancer in comparison with its sporadic cancer counterpart. Here, we investigated the function of Dock2, a gene mutated in ~10% of IBD-associated colorectal cancers that encodes a guanine nucleotide exchange factor (GEF).

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  • Autophagy is a vital process that helps cells break down and recycle their components, with the final step being the degradation of autophagic cargo in lysosomes.* -
  • Researchers used CRISPR/Cas9 technology to identify RNAseK as a crucial transmembrane protein that regulates the degradation of autophagosomes in cells, specifically affecting cargo breakdown while leaving other lysosomal functions intact.* -
  • The study found that without RNAseK, the levels of certain hydrolases decrease, and there is an accumulation of VPS4a, indicating a disruption in the delivery pathway necessary for lysosomal degradation.*
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  • Identification of stearoyl-CoA desaturase (SCD) as a key therapeutic target in improving the outcomes of acute myeloid leukemia (AML) patients, showing its role across different mutational backgrounds.
  • Inhibition of SCD using the drug SSI-4 induces lipotoxicity, leading to cell death in AML models both in lab conditions and in living organisms.
  • The study suggests that combining SCD inhibition with standard chemotherapy enhances the effectiveness of treatment, emphasizing the need for predictive biomarkers and combination therapies for optimal results.
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  • Kindler syndrome (KS) is a rare skin disorder caused by mutations in the FERMT1 gene, leading to a higher risk of aggressive skin cancer, specifically cutaneous squamous cell carcinoma (cSCC).
  • Research shows that FERMT1 levels are elevated in precancerous skin lesions (actinic keratoses) and further in cSCC, suggesting a role in promoting tumor growth.
  • Loss of Kindlin-1 results in enhanced cSCC invasion and tumor growth due to a hypoxic environment and increased glycolysis, with MMP13 playing a key role in increasing the invasive capabilities of these cancer cells.
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  • Scientists found that a specific marker in melanoma (a type of skin cancer), called ALDH1A3, works with another protein called ACSS2 to help cancer cells use sugar (glucose) better and change their genes.
  • They discovered that acetaldehyde, which is a toxic substance, plays a role in this process and can help change gene activity in cancer cells.
  • In experiments with zebrafish that have melanoma, they showed that blocking ALDH1A3 can stop cancer cells from becoming resistant to treatment and may help doctors find new ways to fight the disease.
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  • This study examined how calorie restriction (CR) affects the elemental content and stable isotope ratios in bone collagen and hair keratin in adult mice over a period of 84 days.
  • Mice on higher CR (10-40%) showed decreased nitrogen, carbon, and sulfur levels in their hair, while bone collagen nitrogen levels increased and carbon levels decreased.
  • The findings suggest that changes in the structure of bone collagen and the mobilization of proteins during CR complicate the use of elemental measurements for assessing collagen quality in archaeological contexts, especially where nutrition might be a concern.
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As signalling organelles, cilia regulate their G protein-coupled receptor content by ectocytosis, a process requiring localised actin dynamics to alter membrane shape. Photoreceptor outer segments comprise an expanse of folded membranes (discs) at the tip of highly-specialised connecting cilia, into which photosensitive GPCRs are concentrated. Discs are shed and remade daily.

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  • Tubulin is a key component of the cytoskeleton and has various isotypes in animals, but it's unclear how these isotypes influence microtubule structures in different cell types.
  • Research on 12 patients with primary ciliary dyskinesia and mouse models uncovered variants in the tubulin isotype that disrupted the formation of centrioles and cilia, impacting microtubule dynamics.
  • The study identified different variants causing distinct effects on tubulin interactions, allowing for the classification of patients into three types of ciliopathic diseases, highlighting the unique roles of specific tubulin isotypes in cellular functions.
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Pharmacologic inhibitors of cellular hydroxylase oxygen sensors are protective in multiple preclinical models of inflammation. However, the molecular mechanisms underlying this regulation are only partly understood, preventing clinical translation. We previously proposed a new mechanism for cellular oxygen sensing: oxygen-dependent, (likely) covalent protein oligomer (oxomer) formation.

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  • CD40L-CD40-TRAF signaling is implicated in the progression of atherosclerosis and the pathogenesis of coronary heart disease (CHD), especially in individuals with comorbid conditions like hyperlipidemia, diabetes, and hypertension.
  • In mouse models with diabetes and hypertension, treatment with a TRAF6 inhibitor showed promising results by normalizing oxidative stress and inflammation markers, suggesting that this signaling pathway could serve as a therapeutic target.
  • Analysis of plasma and vascular materials from CHD patients revealed a correlation between elevated inflammatory markers and comorbidities, indicating that addressing these inflammatory pathways could help reduce cardiovascular events in affected individuals.
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The transcriptional co-activator YAP forms complexes with distinct transcription factors, controlling cell fate decisions, such as proliferation and apoptosis. However, the mechanisms underlying its context-dependent function are poorly defined. This study explores the interplay between the TGF-β and Hippo pathways and their influence on YAP's association with specific transcription factors.

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TANK-binding kinase 1 (TBK1) is a potential therapeutic target in multiple cancers, including clear cell renal cell carcinoma (ccRCC). However, targeting TBK1 in clinical practice is challenging. One approach to overcome this challenge would be to identify an upstream TBK1 regulator that could be targeted therapeutically in cancer specifically.

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Loss of functional RAB18 causes the autosomal recessive condition Warburg Micro syndrome. To better understand this disease, we used proximity biotinylation to generate an inventory of potential RAB18 effectors. A restricted set of 28 RAB18 interactions were dependent on the binary RAB3GAP1-RAB3GAP2 RAB18-guanine nucleotide exchange factor complex.

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  • RAS proteins play essential roles in cell signaling, affecting processes like cell growth, specialization, and death, with KRAS being a notable member commonly mutated in cancers.
  • Recent research indicates that not all KRAS mutants are always active, leading to the development of treatments like KRASG12C inhibitors, although resistance remains a challenge.
  • The study employs advanced mass-spectrometry proteomics to analyze the interactions of KRAS variants, revealing important insights into KRAS signaling networks and identifying new connections to other signaling pathways, which could aid in creating better-targeted therapies.
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RhoGAP6 is the most highly expressed GTPase-activating protein (GAP) in platelets specific for RhoA. Structurally RhoGAP6 contains a central catalytic GAP domain surrounded by large, disordered N- and C-termini of unknown function. Sequence analysis revealed three conserved consecutive overlapping di-tryptophan motifs close to the RhoGAP6 C-terminus which were predicted to bind to the mu homology domain (MHD) of δ-COP, a component of the COPI vesicle complex.

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  • The extracellular matrix (ECM) is important in cancer because it can help tumors grow and make treatments less effective.
  • Scientists studied lung cancer tissue to find differences in the ECM between cancerous and normal tissues.
  • They discovered 161 proteins related to the ECM that can help identify lung cancer and found some new markers that could predict how well patients might do after treatment.
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Objective: Immunotherapy for the treatment of pancreatic ductal adenocarcinoma (PDAC) has shown limited efficacy. Poor CD8 T-cell infiltration, low neoantigen load and a highly immunosuppressive tumour microenvironment contribute to this lack of response. Here, we aimed to further investigate the immunoregulatory function of focal adhesion kinase (FAK) in PDAC, with specific emphasis on regulation of the type-II interferon response that is critical in promoting T-cell tumour recognition and effective immunosurveillance.

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Interactions between cells and the extracellular matrix, mediated by integrin adhesion complexes, play key roles in fundamental cellular processes, including the sensing and transduction of mechanical cues. Here, we investigate systems-level changes in the integrin adhesome in patient-derived cutaneous squamous cell carcinoma cells and identify the actin regulatory protein Mena as a key node in the adhesion complex network. Mena is connected within a subnetwork of actin-binding proteins to the LINC complex component nesprin-2, with which it interacts and co-localises at the nuclear envelope.

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RAS-ERK (extracellular signal-regulated kinase) pathway signals are modulated by scaffold proteins that assemble the components of different kinase tiers into a sequential phosphorylation cascade. In the prevailing model scaffold proteins function as isolated entities, where the flux of phosphorylation events progresses downstream linearly, to achieve ERK phosphorylation. We show that different types of scaffold proteins, specifically KSR1 (kinase suppressor of Ras 1) and IQGAP1 (IQ motif-containing guanosine triphosphatase activating protein 1), can bind to each other, forming a complex whereby phosphorylation reactions occur across both species.

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Chronic obstructive pulmonary disease (COPD) is a disease characterized by persistent airway inflammation and disordered macrophage function. The extent to which alterations in macrophage bioenergetics contribute to impaired antioxidant responses and disease pathogenesis has yet to be fully delineated. Through the study of COPD alveolar macrophages (AMs) and peripheral monocyte-derived macrophages (MDMs), we sought to establish if intrinsic defects in core metabolic processes drive macrophage dysfunction and redox imbalance.

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Worldwide, up to 8.8 million excess deaths/year have been attributed to air pollution, mainly due to the exposure to fine particulate matter (PM). Traffic-related noise is an additional contributor to global mortality and morbidity.

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Metabolic reprogramming is critical for tumor initiation and progression. However, the exact impact of specific metabolic changes on cancer progression is poorly understood. Here, we integrate multimodal analyses of primary and metastatic clonally-related clear cell renal cancer cells (ccRCC) grown in physiological media to identify key stage-specific metabolic vulnerabilities.

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