Publications by authors named "Aharon Oren"

Following a proposal for further integration of names into the International Code of Nomenclature of Prokaryotes, I here report the outcome of the ballot on this proposal by the members of the International Committee on Systematics of Prokaryotes.

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A hybrid in-person and online open plenary meeting of the International Committee on Systematics of Prokaryotes (ICSP) was held on 22 October 2024 at the Consiglio Nazionale delle Ricerche, Sesto Fiorentino, Florence, Italy, and via Teams just prior to the IUMS 2024 Congress. To comply with Articles 4(d) and 5(d) (1) of the statutes of the ICSP, the minutes of this meeting are published here.

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Following a proposal to emend Recommendation 6(7), Rule 64 and Appendix 9, Section D of the International Code of Nomenclature of Prokaryotes to regulate the formation of prokaryote names from personal names, I hereby report the outcome of the ballot on this proposal by the members of the International Committee on Systematics of Prokaryotes.

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Article Synopsis
  • * The illegitimacy of these names is explained by rules from the International Code of Nomenclature of Prokaryotes, specifically Principle 2 and Rules 51b(5) and 51b(4).
  • * As a solution, new replacement generic names and their corresponding type species are being proposed to avoid confusion in scientific classification.
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Following a proposal to emend Appendix 9 of the International Code of Nomenclature of Prokaryotes with guidelines to regulate the use of connecting vowels in compound names after stems ending in the same vowel, I here report the outcome of the ballot on this proposal by the members of the International Committee on Systematics of Prokaryotes. The new guidelines to be incorporated in Appendix 9 are presented.

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According to the Rules of the International Code of Nomenclature of Prokaryotes (ICNP) and its appendices, names of higher taxa are formed by the addition of the appropriate suffix to the stem of the name of the type genus, and word stems derived from Latin and/or Greek are combined to compound names by means of an appropriate connecting vowel. The way the word 'stem' is used in the ICNP differs from the meaning of this term in textbooks of Latin and Greek grammar. We therefore propose to add a Note to Rule 8, clarifying that the term 'stem' when used in the ICNP corresponds with that part of the word that does not vary among the forms of the noun in the oblique cases, i.

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Our understanding of the microbial diversity inhabiting hypersaline environments, here defined as containing >100-150 g/L salts, has greatly increased in the past five years. Halophiles are found in each of the three domains of life. Many novel types have been cultivated, and metagenomics and other cultivation-independent approaches have revealed the existence of many previously unrecognized lineages.

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Microorganisms inhabiting gypsum have been observed in environments that differ greatly in water availability. Gypsum colonized by microorganisms, including cyanobacteria, eukaryotic algae, and diverse heterotrophic communities, occurs in hot, arid or even hyperarid environments, in cold environments of the Antarctic and Arctic zones, and in saline and hypersaline lakes and ponds where gypsum precipitates. Fossilized microbial remnants preserved in gypsum were also reported.

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Prokaryotes are ubiquitous in the biosphere, important for human health and drive diverse biological and environmental processes. Systematics of prokaryotes, whose origins can be traced to the discovery of microorganisms in the 17th century, has transitioned from a phenotype-based classification to a more comprehensive polyphasic taxonomy and eventually to the current genome-based taxonomic approach. This transition aligns with a foundational shift from studies focused on phenotypic traits that have limited comparative value to those using genome sequences.

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Background: The Atribacterota are widely distributed in the subsurface biosphere. Recently, the first Atribacterota isolate was described and the number of Atribacterota genome sequences retrieved from environmental samples has increased significantly; however, their diversity, physiology, ecology, and evolution remain poorly understood.

Results: We report the isolation of the second member of Atribacterota, Thermatribacter velox gen.

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Two bacterial strains, designated FR2A1 and MT2-5-38, were isolated from the surface sediments of an oyster farm on a tidal flat in Quanzhou Bay, China. Both strains were Gram-stain-negative, rod-shaped, aerobic, catalase-positive, and oxidase-positive. The 16S rRNA gene sequences of the two strains were 100% identical and had the highest similarity (97.

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