Publications by authors named "Agata N Makar"

Article Synopsis
  • Autophagy is a vital process that helps cells break down and recycle their components, with the final step being the degradation of autophagic cargo in lysosomes.* -
  • Researchers used CRISPR/Cas9 technology to identify RNAseK as a crucial transmembrane protein that regulates the degradation of autophagosomes in cells, specifically affecting cargo breakdown while leaving other lysosomal functions intact.* -
  • The study found that without RNAseK, the levels of certain hydrolases decrease, and there is an accumulation of VPS4a, indicating a disruption in the delivery pathway necessary for lysosomal degradation.*
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Wilfling et al. (2020) characterize a selective autophagy pathway in yeast for early clathrin-mediated endocytosis (CME) proteins facilitated by the phase separation of the CME protein, Ede1, which acts as an intrinsic autophagy receptor for the degradation of Ede1-dependent endocytic protein deposits (ENDs).

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Autophagosomes are vital organelles required to facilitate the lysosomal degradation of cytoplasmic cargo, thereby playing an important role in maintaining cellular homeostasis. A number of autophagy-related (ATG) protein complexes are recruited to the site of autophagosome biogenesis where they act to facilitate membrane growth and maturation. Regulated recruitment of ATG complexes to autophagosomal membranes is essential for their autophagic activities and is required to ensure the efficient engulfment of cargo destined for lysosomal degradation.

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Membrane targeting of autophagy-related complexes is an important step that regulates their activities and prevents their aberrant engagement on non-autophagic membranes. ATG16L1 is a core autophagy protein implicated at distinct phases of autophagosome biogenesis. In this study, we dissected the recruitment of ATG16L1 to the pre-autophagosomal structure (PAS) and showed that it requires sequences within its coiled-coil domain (CCD) dispensable for homodimerisation.

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