Directed network motifs in Alzheimer's disease and mild cognitive impairment.

Directed network motifs are the building blocks of complex networks, such as human brain networks, and capture deep connectivity information that is not contained in standard network measures. In this paper we present the first application of directed network motifs in vivo to human brain networks, utilizing recently developed directed progression networks which are built upon rates of cortical thickness changes between brain regions. This is in contrast to previous studies which have relied on simulations and in vitro analysis of non-human brains.

Stochastic geometric network models for groups of functional and structural connectomes.

Structural and functional connectomes are emerging as important instruments in the study of normal brain function and in the development of new biomarkers for a variety of brain disorders. In contrast to single-network studies that presently dominate the (non-connectome) network literature, connectome analyses typically examine groups of empirical networks and then compare these against standard (stochastic) network models. The current practice in connectome studies is to employ stochastic network models derived from social science and engineering contexts as the basis for the comparison.

Directed progression brain networks in Alzheimer's disease: properties and classification.

This article introduces a new approach in brain connectomics aimed at characterizing the temporal spread in the brain of pathologies like Alzheimer's disease (AD). The main instrument is the development of "directed progression networks" (DPNets), wherein one constructs directed edges between nodes based on (weakly) inferred directions of the temporal spreading of the pathology. This stands in contrast to many previously studied brain networks where edges represent correlations, physical connections, or functional progressions.

Hierarchical networks, power laws, and neuronal avalanches.

We show that in networks with a hierarchical architecture, critical dynamical behaviors can emerge even when the underlying dynamical processes are not critical. This finding provides explicit insight into current studies of the brain's neuronal network showing power-law avalanches in neural recordings, and provides a theoretical justification of recent numerical findings. Our analysis shows how the hierarchical organization of a network can itself lead to power-law distributions of avalanche sizes and durations, scaling laws between anomalous exponents, and universal functions-even in the absence of self-organized criticality or critical points.

Construction and analysis of random networks with explosive percolation.

The existence of explosive phase transitions in random (Erdös Rényi-type) networks has been recently documented by Achlioptas, D'Souza, and Spencer [Science 323, 1453 (2009)] via simulations. In this Letter we describe the underlying mechanism behind these first-order phase transitions and develop tools that allow us to identify (and predict) when a random network will exhibit an explosive transition. Several interesting new models displaying explosive transitions are also presented.

Nonlinear dynamics in combinatorial games: renormalizing Chomp.

We develop a new approach to combinatorial games that reveals connections between such games and some of the central ideas of nonlinear dynamics: scaling behaviors, complex dynamics and chaos, universality, and aggregation processes. We take as our model system the combinatorial game Chomp, which is one of the simplest in a class of "unsolved" combinatorial games that includes Chess, Checkers, and Go. We discover that the game possesses an underlying geometric structure that "grows" (reminiscent of crystal growth), and show how this growth can be analyzed using a renormalization procedure adapted from physics.