Publications by authors named "Abhiram Das"

Cyberinfrastructure projects (CIPs) are complex, integrated systems that require interaction and organization amongst user, developer, hardware, technical infrastructure, and funding resources. Nevertheless, CIP usability, functionality, and growth do not scale with the sum of these resources. Instead, growth and efficient usage of CIPs require access to 'hidden' resources.

View Article and Find Full Text PDF
Article Synopsis
  • Plant root systems are essential for plant growth and productivity, but existing analysis methods are limited and predominantly manual, especially in field studies.
  • The DIRT platform is introduced as an open-source online tool that allows researchers to store, analyze, and share crop root system data efficiently while leveraging advanced computing resources.
  • DIRT enables automated high-throughput phenotyping in field conditions, improving collaboration and accessibility in agricultural research, and facilitating new discoveries in crop root architecture.
View Article and Find Full Text PDF

Current plant phenotyping technologies to characterize agriculturally relevant traits have been primarily developed for use in laboratory and/or greenhouse conditions. In the case of root architectural traits, this limits phenotyping efforts, largely, to young plants grown in specialized containers and growth media. Hence, novel approaches are required to characterize mature root systems of older plants grown under actual soil conditions in the field.

View Article and Find Full Text PDF

Background: Leaf vein networks are critical to both the structure and function of leaves. A growing body of recent work has linked leaf vein network structure to the physiology, ecology and evolution of land plants. In the process, multiple institutions and individual researchers have assembled collections of cleared leaf specimens in which vascular bundles (veins) are rendered visible.

View Article and Find Full Text PDF