Publications by authors named "Abdolrazagh Hashemi-Shahraki"

Background: Chronic wound infections caused by Enterococcus faecalis pose formidable challenges in clinical management, exacerbated by the emergence of vancomycin-resistant strains. Phage therapy offers a targeted approach but encounters delivery hurdles. Due to their biocompatibility and controlled release properties, hydrogels hold promise as carriers.

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Lower respiratory tract infections (LRTIs) present a significant global health burden, exacerbated by the rise in antimicrobial resistance (AMR). The persistence and evolution of multidrug-resistant bacteria intensifies the urgency for alternative treatments. This review explores bacteriophage (phage) therapy as an innovative solution to combat bacterial LRTIs.

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Enterococcus faecalis, a Gram-positive bacterium, poses a significant clinical challenge owing to its intrinsic resistance to a broad spectrum of antibiotics, warranting urgent exploration of innovative therapeutic strategies. This study investigated the viability of phage therapy as an alternative intervention for antibiotic-resistant E. faecalis, with a specific emphasis on the comprehensive genomic analysis of bacteriophage SAM-E.

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Article Synopsis
  • Two lytic phages, UF_RH7 and UF_RH9, have been sequenced for their genomes.
  • UF_RH7 has a genome length of 58,217 base pairs (bp) and encodes 82 proteins, while UF_RH9 has a genome length of 42,609 bp and encodes 55 proteins.
  • UF_RH7 is classified under a specific family, and UF_RH9 belongs to a different class.
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Hospital readmission within 30 days poses challenges for healthcare providers, policymakers, and patients because of its impact on care quality, costs, and outcomes. Patients with interstitial lung disease (ILD) are particularly affected by readmission, which is associated with increased morbidity and mortality and reduced quality of life. Because small sample sizes have hindered previous studies, this study seeks to address this gap in knowledge by examining a large-scale dataset.

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Here, we introduce UF_RH5, a novel lytic phage targeting clinically isolated Pseudomonas aeruginosa. It belongs to the morphology family, genus, with a 42,566-bp genome with a GC content of 53.60%, encoding 58 proteins.

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Article Synopsis
  • * The research, conducted at three beaches in Ontario, Canada, showed that while spatial variation among sites was low, there was significant temporal variation, with high bacterial activity in summer and fall, and surprising activity in winter despite cold temperatures.
  • * The findings highlight that many bacterial genera remained inactive during winter, and flag potential health risks associated with certain active taxa, indicating a need for further research on how environmental changes affect these communities.
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We report the genome sequence of a lytic phage named UF_RH6, which infects Pseudomonas aeruginosa. This phage was isolated from a respiratory secretion sample from a patient with pulmonary P. aeruginosa.

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Here, we present the genome sequence of a novel Pseudomonas aeruginosa bacteriophage called UF_RH1. This lytic phage has a genome size of 42,567 bp and is classified as a member of the family and the genus. UF_RH1 shares genetic similarities with phage vB_SmaS-DLP_2.

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  • * A study in Iran collected wastewater samples from hospitals and used specific phages to target and reduce harmful bacteria levels in the wastewater.
  • * The results showed that the phage cocktail significantly decreased bacterial counts by up to 99.9%, indicating its potential to enhance public health and water quality.
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Understanding the diversity of bacteria and E.coli levels at beaches is important for managing health risks. This study compared temporal changes of the bacterial communities of Belle Isle Beach (Detroit, MI) and Sand Point Beach (Windsor, ONT), both located near the Lake St.

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  • * Researchers tested α-MSH in two different in vitro models of sarcoidosis and an in vivo mouse model, finding that it reduced inflammatory markers and immune cell counts associated with the disease.
  • * The findings suggest that α-MSH could play a significant role in treating pulmonary sarcoidosis by targeting pathways involved in inflammation and immune response.
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Background: Little is known about the impact of the ecosystem disruption and its contribution on the non-tuberculosis mycobacteria (NTM) diseases (cases) rate in Florida (FL), a state with a high prevalence of NTM in the United States. We aimed to evaluate the epidemiological distribution of NTM in FL and identify its association with extreme weather events.

Methods: We used OneFlorida Clinical Research Consortium dataset and extracted data on NTM cases using ICD codes 9- CM 031.

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Background: Long-term trends in freshwater bacterial community composition (BCC) and dynamics are not yet well characterized, particularly in large lake ecosystems. We addressed this gap by temporally (15 months) and spatially (6 sampling locations) characterizing BCC variation in lakes Erie and St. Clair; two connected ecosystems in the Laurentian Great Lakes.

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Article Synopsis
  • GHRH stimulates growth hormone release, which is important for immune cell growth, but the effects of its antagonist in granulomatous diseases are unclear.
  • Research showed expression of GHRH receptors in sarcoidosis tissue and demonstrated that the antagonist MIA602 reduces inflammatory markers in different granuloma models.
  • Results suggest MIA602 may be a promising treatment for sarcoidosis by targeting GHRH receptors, showing anti-inflammatory effects without inducing cell death.
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  • Limited understanding exists regarding how new SARS-CoV-2 variants forecast in North America and their interactions with vaccine-induced antibodies.
  • The study utilized computational modeling to predict how variants like B.1.1.7, B.1.351, B.1.617, and P.1 interact with human antibodies and receptors, revealing varying levels of affinity that affect their prevalence.
  • Results indicate that while B.1.1.7 is rapidly growing, herd immunity may control other variants; however, the emergence of these variants suggests a need for booster shots to enhance immunity against those with lower affinity scores.*
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The aquatic bacterial community (BC) plays a vital role in determining the nature and rate of ecosystem function. However, the biotic and abiotic factors influencing BC structure and function are largely unknown. Hence, the current study characterizes the impact of biotic and abiotic factors on aquatic bacterial biodiversity to determine whether the dominant effects are biotic or abiotic by partitioning their relative effects across temperate Canadian lakes.

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Members of complex are known for causing severe, chronic infections. Members of are a new "antibiotic nightmare" as one of the most resistant organisms to chemotherapeutic agents. Treatment of these infections is challenging due to the either intrinsic or acquired resistance of the complex to the available antibiotics.

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Bacteria play a key role in freshwater biogeochemical cycling as well as water safety, but short-term trends in freshwater bacterial community composition and dynamics are not yet well characterized. We sampled four public beaches in southern Ontario, Canada; in June, July, and August (2016) over a 24-h (diel) cycle at 2-h intervals. Using high-throughput sequencing of 16S rRNA gene, we found substantial bi-hourly and day/night variation in the bacterial communities with considerable fluctuation in the relative abundance of Actinobacteria and Proteobacteria phyla.

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Background And Objectives: has a wide distribution in northern hemisphere of the world. Up to now, there was little information about the spp. situation in the environmental samples in Iran.

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Background: Q fever is a zoonotic disease of great public health importance in Iran. This disease is presented with high phase I antibody development in chronic and high phase II antibody in the acute form of illness. This study was conducted to evaluate the seroprevalence of Q fever among high-risk occupations in the Ilam province in Western Iran.

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The characterization of microbial community dynamics using genomic methods is rapidly expanding, impacting many fields including medical, ecological, and environmental research and applications. One of the biggest challenges for such studies is the isolation of environmental DNA (eDNA) from a variety of samples, diverse microbes, and widely variable community compositions. The current study developed environmentally friendly, user safe, economical, and high throughput eDNA extraction methods for mixed aquatic microbial communities and tested them using 16 s rRNA gene meta-barcoding.

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Infections caused by non-tuberculous mycobacteria (NTM) is increasing wordwide. Due to the difference in treatment of NTM infections and tuberculosis, rapid species identification of mycobacterial clinical isolates is necessary for the effective management of mycobacterial diseases treatment and their control strategy. In this study, a cost-effective technique, real-time PCR coupled with high-resolution melting (HRM) analysis, was developed for the differentiation of Mycobacterial species using a novel sequence.

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