Enabling Electric Field Model of Microscopically Realistic Brain.

Background: Modeling brain stimulation at the microscopic scale may reveal new paradigms for various stimulation modalities.

Objective: We present the largest map to date of extracellular electric field distributions within a layer L2/L3 mouse primary visual cortex brain sample. This was enabled by the automated analysis of serial section electron microscopy images with improved handling of image defects, covering a volume of 250 × 140 × 90 μm³.

Enabling Electric Field Model of Microscopically Realistic Brain.

Unlabelled: Modeling brain stimulation at the microscopic scale may reveal new paradigms for various stimulation modalities. We present the largest map to date of extracellular electric field distributions within a layer L2/L3 mouse primary visual cortex brain sample. This was enabled by the automated analysis of serial section electron microscopy images with improved handling of image defects, covering a volume of 250 × 140 × 90 μm .

Software Package for Transcranial Magnetic Stimulation Coil and Coil Array Analysis and Design.

Objective: This study aims to describe a MATLAB software package for transcranial magnetic stimulation (TMS) coil analysis and design.

Approach: Electric and magnetic fields of the coils as well as their self- and mutual (for coil arrays) inductances are computed, with or without a magnetic core. Solid and stranded (Litz wire) conductors are also taken into consideration.

Estimations of Charge Deposition Onto Convoluted Axon Surfaces Within Extracellular Electric Fields.

Objective: Biophysical models of neural stimulation are a valuable approach to explaining the mechanisms of neuronal recruitment via applied extracellular electric fields. Typically, the applied electric field is estimated via a macroscopic finite element method solution and then applied to cable models as an extracellular voltage source. However, the field resolution is limited by the finite element size (typically 10's-100's of times greater than average neuronal cross-section).

Influence of charges deposited on membranes of human hyperdirect pathway axons on depolarization during subthalamic deep brain stimulation.

The motor hyperdirect pathway (HDP) is a key target in the treatment of Parkinson's disease with deep brain stimulation (DBS). Biophysical models of HDP DBS have been used to explore the mechanisms of stimulation. Built upon finite element method volume conductor solutions, such models are limited by a resolution mismatch, where the volume conductor is modeled at the macro scale, while the neural elements are at the micro scale.

Modeling transcranial magnetic stimulation coil with magnetic cores.

Accurate modeling of transcranial magnetic stimulation (TMS) coils with the magnetic core is largely an open problem since commercial (quasi) magnetostatic solvers do not output specific field characteristics (e.g. induced electric field) and have difficulties when incorporating realistic head models.

The effect of meninges on the electric fields in TES and TMS. Numerical modeling with adaptive mesh refinement.

Background: When modeling transcranial electrical stimulation (TES) and transcranial magnetic stimulation (TMS) in the brain, the meninges - dura, arachnoid, and pia mater - are often neglected due to high computational costs.

Objective: We investigate the impact of the meningeal layers on the cortical electric field in TES and TMS while considering the headreco segmentation as the base model.

Method: We use T1/T2 MRI data from 16 subjects and apply the boundary element fast multipole method with adaptive mesh refinement, which enables us to accurately solve this problem and establish method convergence at reasonable computational cost.

Boundary element fast multipole method for modeling electrical brain stimulation with voltage and current electrodes.

. To formulate, validate, and apply an alternative to the finite element method (FEM) high-resolution modeling technique for electrical brain stimulation-the boundary element fast multipole method (BEM-FMM). To include practical electrode models for both surface and embedded electrodes.