Publications by authors named "ARKHIPOV A"

(β-ketoacyl-acyl carrier protein (ACP) synthases II), (fatty acid thioesterases), (stearoyl-ACP desaturase), and (fatty acid desaturases) are the vital gene families involved in fatty acid (FA) synthesis in L. However, information on the number and location of these genes and which ones are key to the formation of FAs in fruit seeds and pulp was not complete. Our study aimed to solve this issue using the available genomic sequences and transcriptome data that we obtained.

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Flax is an important crop grown for seed and fiber. Flax chromosome number is 2n = 30, and its genome size is about 450-480 Mb. To date, the genomes of several flax varieties have been sequenced and assembled.

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is a pathogenic fungus that infects flax and causes significant yield losses. In this study, we assembled the genomes of four highly virulent strains using the Oxford Nanopore Technologies (ONT, R10.4.

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The local field potential (LFP), the low-frequency part of the extracellular potential, reflects transmembrane currents in the vicinity of the recording electrode. Thought mainly to stem from currents caused by synaptic input, it provides information about neural activity complementary to that of spikes, the output of neurons. However, the many neural sources contributing to the LFP, and likewise the derived current source density (CSD), can often make it challenging to interpret.

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The use of plant growth-promoting rhizobacteria presents a promising addition to conventional mineral fertilizer use and an alternative strategy for sustainable agricultural crop production. However, genotypic variations in the plant host may result in variability of the beneficial effects from these plant-microbe interactions. This study examined growth promotion effects of commercial vegetable crop cultivars of tomato, cucumber and broccoli following application with five rhizosphere bacteria.

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  • The study focuses on comparing two surgical techniques—sternotomy and thoracotomy—for treating aortic coarctation, aiming to find an effective approach that minimizes complications and avoids recoarctation.
  • 103 procedures were divided between the two techniques, with a matching analysis of 25 patients from each group to ensure fair comparison.
  • Results showed similar mortality rates and early complications for both methods, but the sternotomy approach indicated a lower rate of recoarctation, suggesting it might be the preferred option for surgical repair.
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The possible contribution of phonon drag effect to the thermoelectrically sustained potential of a heated nanoisland on a semiconductor surface was estimated in a first principal consideration. We regarded electrons and phonons as interacting particles, and the interaction cross-section was derived from the basic theory of semiconductors. The solution of the equation of motion for average electrons under the simultaneous action of phonon drag and electric field gave the distributions of phonon flux, density of charge carriers and electric potential.

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  • - In the KEYNOTE-826 study, pembrolizumab combined with chemotherapy significantly boosted overall survival (OS) and progression-free survival (PFS) in patients with advanced cervical cancer, with specific attention to those using bevacizumab.
  • - The analysis included 617 patients, with a majority excluded from bevacizumab due to medical reasons; outcomes showed that those receiving pembrolizumab generally had better survival metrics, regardless of bevacizumab use.
  • - Patients on pembrolizumab experienced a high rate of severe side effects, with 74% suffering grade ≥3 treatment-related adverse events in the bevacizumab group.
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Understanding the brain requires studying its multiscale interactions from molecules to networks. The increasing availability of large-scale datasets detailing brain circuit composition, connectivity, and activity is transforming neuroscience. However, integrating and interpreting this data remains challenging.

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Human biostasis, the preservation of a human when all other contemporary options for extension of quality life are exhausted, offers the speculative potential for survival via continuation of life in the future. While provably reversible preservation, also known as suspended animation, is not yet possible for humans, the primary justification for contemporary biostasis is the preservation of the brain, which is broadly considered the seat of memories, personality, and identity. By preserving the information contained within the brain's structures, it may be possible to resuscitate a healthy whole individual using advanced future technologies.

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  • A fungal pathogen affecting flax, strain #394-2, was studied, resulting in the first complete annotated genome assembly, revealing a nuclear genome of 53.7 Mb with ten core and two accessory chromosomes and a mitochondrial genome of 39.1 kb.
  • The annotation process identified 12,449 genes and predicted 550 effector proteins, suggesting a significant role in the pathogen's virulence, particularly in repeat-rich genomic regions.
  • Comparing the genomic structures among related species showed differences due to chromosomal rearrangements, which helps enhance the understanding of the pathogen's mechanisms and contributes to strategies for protecting flax from damage.
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Recent studies have found dramatic cell-type-specific responses to stimulus novelty, highlighting the importance of analyzing the cortical circuitry at this granularity to understand brain function. Although initial work characterized activity by cell type, the alterations in cortical circuitry due to interacting novelty effects remain unclear. We investigated circuit mechanisms underlying the observed neural dynamics in response to novel stimuli using a large-scale public dataset of electrophysiological recordings in behaving mice and a population network model.

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Introduction: Surgical repair of aortic arch hypoplasia in children requires a "dry" surgical field with reliable end-organ protection. Perfusion strategies commonly involve deep hypothermic circulatory arrest (DHCA) and variations of the continuous perfusion techniques, such as selective antegrade cerebral perfusion (SACP) and full-flow perfusion with double aortic cannulation (DAC). We aimed to evaluate the end-organ protection in the surgery of aortic arch hypoplasia in newborns and infants using DHCA and DAC.

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Based on organophosphorus branched polyols (AEPAs) synthesized using triethanolamine (TEOA), -phosphoric acid (OPA), and polyoxyethylene glycol with MW = 400 (PEG), vapor-permeable polyurethane ionomers (AEPA-PEG-PUs) were obtained. During the synthesis of AEPAs, the reaction of the OPA etherification with polyoxyethylene glycol was studied in a wide temperature range and at different molar ratios of the starting components. It turned out that OPA simultaneously undergoes a catalytically activated etherification reaction with triethanolamine and PEG.

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Background: Aortic atresia with ventricular septal defect is a very rare congenital cardiac anomaly, especially in combination with aortic arch interruption. It is always challenging to choose the optimal treatment tactics for such patients. One of the possible types of intervention is the Yasui procedure.

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A large body of research has shown that schizophrenia patients demonstrate increased brain structural aging. Although this process may be coupled with aberrant changes in intrinsic functional architecture of the brain, they remain understudied. We hypothesized that there are brain regions whose whole-brain functional connectivity at rest is differently associated with brain structural aging in schizophrenia patients compared to healthy controls.

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In an ever-changing visual world, animals' survival depends on their ability to perceive and respond to rapidly changing motion cues. The primary visual cortex (V1) is at the forefront of this sensory processing, orchestrating neural responses to perturbations in visual flow. However, the underlying neural mechanisms that lead to distinct cortical responses to such perturbations remain enigmatic.

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In complex environments, animals can adopt diverse strategies to find rewards. How distinct strategies differentially engage brain circuits is not well understood. Here, we investigate this question, focusing on the cortical Vip-Sst disinhibitory circuit between vasoactive intestinal peptide-postive (Vip) interneurons and somatostatin-positive (Sst) interneurons.

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  • The local field potential (LFP) represents low-frequency electrical activity reflecting nearby neural currents, primarily due to synaptic inputs, and complements neural firing spikes but is complex to interpret due to multiple sources.
  • Traditional methods like PCA and ICA aim to decompose LFP data but struggle with the physiologically intertwined processes, leading to inaccurate interpretations.
  • The new Laminar Population Analysis (LPA) algorithm improves upon these methods by utilizing multiunit activity (MUA) alongside LFP data, effectively identifying sources and sinks of neural activity in the visual cortex with greater accuracy through physiological rather than statistical assumptions.
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Importance: The KEYNOTE-826 randomized clinical trial showed statistically significant and clinically meaningful survival benefits with the addition of pembrolizumab to chemotherapy with or without bevacizumab in patients with persistent, recurrent, or metastatic cervical cancer. Treatment effects in patient subgroups of the study population are unknown.

Objective: To assess efficacy outcomes in patient subgroups of KEYNOTE-826.

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Recent studies have found dramatic cell-type specific responses to stimulus novelty, highlighting the importance of analyzing the cortical circuitry at the cell-type specific level of granularity to understand brain function. Although initial work classified and characterized activity for each cell type, the specific alterations in cortical circuitry-particularly when multiple novelty effects interact-remain unclear. To address this gap, we employed a large-scale public dataset of electrophysiological recordings in the visual cortex of awake, behaving mice using Neuropixels probes and designed population network models to investigate the observed changes in neural dynamics in response to a combination of distinct forms of novelty.

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Article Synopsis
  • The KEYNOTE-826 trial tested the effectiveness of pembrolizumab combined with chemotherapy in patients with persistent, recurrent, or metastatic cervical cancer, showing significant improvements in survival rates compared to placebo plus chemotherapy.
  • At the final data analysis, median overall survival (OS) for those receiving pembrolizumab was significantly higher than for those on placebo, with results of 28.6 months vs. 16.5 months in one group and similar patterns in others, indicating strong benefits across various patient populations.
  • However, there were more grade ≥3 adverse events reported in the pembrolizumab group (82.4%) compared to the placebo group (75.4%), highlighting the need to consider potential side effects alongside treatment
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TRPV1 represents a non-selective transient receptor potential cation channel found not only in sensory neurons, but also in motor nerve endings and in skeletal muscle fibers. However, the role of TRPV1 in the functioning of the neuromuscular junction has not yet been fully established. In this study, the Levator Auris Longus muscle preparations were used to assess the effect of pharmacological activation of TRPV1 channels on neuromuscular transmission.

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  • Researchers created two types of polysiloxanes (cubic and linear) with branches made of polyoxyethylene using specific chemicals, finding that these new materials don't easily self-condense.* -
  • A detailed study showed how varying the amount of copper chloride affects the structure of these polysiloxanes and their ability to improve the absorption characteristics of certain membranes made from block copolymers.* -
  • The developed membranes demonstrated increased sorption capacity and high permeability for organic dyes and metal ions, which linked their internal structures to successful chemical reactions involving an analytical reagent (PAN) and copper chloride.*
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Local field potential (LFP) recordings reflect the dynamics of the current source density (CSD) in brain tissue. The synaptic, cellular, and circuit contributions to current sinks and sources are ill-understood. We investigated these in mouse primary visual cortex using public Neuropixels recordings and a detailed circuit model based on simulating the Hodgkin-Huxley dynamics of >50,000 neurons belonging to 17 cell types.

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