The nematode worm Caenorhabditis elegans has been employed as a popular model organism in many fields of biological research. In this paper, we present a microfluidic device for facilitating chemical testing using C. elegans.
View Article and Find Full Text PDFAnnu Int Conf IEEE Eng Med Biol Soc
October 2015
This paper presents an automated robotic micromanipulation system capable of force-controlled mechanical stimulation and fluorescence imaging of Drosophila larvae, for mechanotransduction studies of Drosophila neural circuitry. An elastomeric microdevice is developed for efficient immobilization of an array of larvae for subsequent force-controlled touching. A microelectromechanical systems (MEMS) based force sensor is integrated into the system for closed-loop force control of larva touching at a resolution of 50 μN.
View Article and Find Full Text PDFPhys Rev E Stat Nonlin Soft Matter Phys
January 2013
We propose a toy model of a heteropolymer chain capable of forming planar secondary structures typical for RNA molecules. In this model, the sequential intervals between neighboring monomers along a chain are considered as quenched random variables, and energies of nonlocal bonds are assumed to be concave functions of those intervals. A few factors are neglected: the contribution of loop factors to the partition function, the variation in energies of different types of complementary nucleotides, the stacking interactions, and constraints on the minimal size of loops.
View Article and Find Full Text PDFPhys Rev E Stat Nonlin Soft Matter Phys
December 2010
We consider a (1+1)-dimensional ballistic deposition process with next-nearest-neighbor interactions, which belongs to the Kardar-Parisi-Zhang (KPZ) universality class. The focus of our analysis is on the properties of structures appearing in the bulk of a growing aggregate: a forest of independent clusters separated by "crevices." Competition for growth (mutual screening) between different clusters results in "thinning" of this forest, i.
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