Biomedical Research Programs at Present and Future High-Energy Particle Accelerators.

Biomedical applications at high-energy particle accelerators have always been an important section of the applied nuclear physics research. Several new facilities are now under constructions or undergoing major upgrades. While the main goal of these facilities is often basic research in nuclear physics, they acknowledge the importance of including biomedical research programs and of interacting with other medical accelerator facilities providing patient treatments.

Stationary solitary and kink solutions in the helicoidal Peyrard-Bishop model of DNA molecule.

We study nonlinear dynamics of the DNA molecule relying on a helicoidal Peyrard-Bishop model. We look for traveling wave solutions and show that a continuum approximation brings about kink solitons moving along the chain. This statement is supported by the numerical solution of a relevant dynamical equation of motion.

Effect of mutant NMDA receptors on the oscillations in a model of hippocampus.

A computation approach to identify the effect of missense mutations on the protein function is proposed. Using molecular dynamics simulation we have analyzed the gating kinetics of mutant NMDA synaptic receptors carrying mutations in their NR2 subunits. Analysis of channel geometry and Mg ion binding allowed to estimate the receptor conductivity.

Optimized neuron models for estimation of charged particle energy deposition in hippocampus.

The study of evaluating radiation risk on the central nervous system induced by space-born charged particles is very complex and challenging task in space radiobiology and radiation protection. To overcome computational difficulties in this field, we developed simplified neuron models with properties equivalent to realistic neuron morphology. Three-dimensional structure and parameters of simplified and complex neuron models with realistic morphology were obtained from the experimental data.

Demodulated standing solitary wave and DNA-RNA transcription.

Nonlinear dynamics of DNA molecule at segments where DNA-RNA transcription occurs is studied. Our basic idea is that the solitary wave, moving along the chain, transforms into a demodulated one at these segments. The second idea is that the wave becomes a standing one due to interaction with DNA surrounding, e.