Manifold-based approach for neural network robustness analysis.

It is important to understand the mathematical foundations of neural networks and to include robustness in model evaluation. Here, we introduce algorithms based on manifold curvature estimation to assess neural network robustness. These algorithms rely solely on training data and do not require regular or adversarial test data.

Mathematical and Machine Learning Approaches for Classification of Protein Secondary Structure Elements from Coordinates.

Determining Secondary Structure Elements (SSEs) for any protein is crucial as an intermediate step for experimental tertiary structure determination. SSEs are identified using popular tools such as DSSP and STRIDE. These tools use atomic information to locate hydrogen bonds to identify SSEs.

Endoplasmic reticulum stress regulates glutathione metabolism and activities of glutathione related enzymes in Arabidopsis.

Stress conditions generate an extra load on protein folding machinery in the endoplasmic reticulum (ER) and if the ER cannot overcome this load, unfolded proteins accumulate in the ER lumen, causing ER stress. ER lumen localised protein disulfide isomerase (PDI) catalyses the generation of disulfide bonds in conjugation with ER oxidoreductase1 (ERO1) during protein folding. Mismatched disulfide bonds are reduced by the conversion of GSH to GSSG.

Changes in redox regulation during transition from C to single cell C photosynthesis in Bienertia sinuspersici.

Bienertia sinuspersici performs single cell C photosynthesis without Kranz anatomy. Peripheral and central cytoplasmic compartments in a single chlorenchyma cell act as mesophyll cells and bundle sheath cells. Development of this specialized mechanism is gradual during plant development.

Halophytes as a source of salt tolerance genes and mechanisms: a case study for the Salt Lake area, Turkey.

The worst case scenario of global climate change predicts both drought and salinity would be the first environmental factors restricting agriculture and natural ecosystems, causing decreased crop yields and plant growth that would directly affect human population in the next decades. Therefore, it is vital to understand the biology of plants that are already adapted to these extreme conditions. In this sense, extremophiles such as the halophytes offer valuable genetic information for understanding plant salinity tolerance and to improve the stress tolerance of crop plants.