Publications by authors named "A Groom"

Understanding the association between initial experimentation with a tobacco product and subsequent patterns of tobacco use among youth is important to informing prevention activities for youth in the US. We conducted an online survey from August to October 2017 among youth aged 13-18 years. The current analysis focused on respondents reporting initial experimentation with any tobacco product (n = 2,022).

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Article Synopsis
  • Proteomics focuses on identifying and quantifying proteins in biological samples, with the complete protein set of an organism called the proteome.
  • Advancements in high-throughput technology, like Olink Proteomic Proximity Extension Assay, have facilitated detailed studies of inflammatory proteins in large populations, such as the Olink® Target 96 panel that measures 92 inflammatory proteins.
  • The Avon Longitudinal Study of Parents and Children (ALSPAC) used this technology to analyze blood samples from over 8,900 participants, revealing strong correlations in protein levels and establishing a valuable dataset for future research on inflammation and its impact on health.
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To optimize the efficient introduction and deployment of COVID-19 vaccines across the globe during the COVID-19 pandemic, in April 2021 WHO launched a new process and tools for countries to rapidly review the early phase of countries' COVID-19 vaccine introduction. This methodology is called the COVID-19 vaccination intra-action review, also known as mini COVID-19 vaccine post-introduction evaluation (mini-cPIE). As of November 2022, 46 mini-cPIEs had been conducted.

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Single-cell assay for transposase-accessible chromatin with sequencing (scATAC-seq) resolves the heterogeneity of epigenetic states across cells but does not typically capture exonic mutations, which limits our knowledge of how somatic mutations alter chromatin landscapes. Here, we present a plate-based approach coupling high-sensitivity genotyping of genomic loci with high-content scATAC-seq libraries from the same single cells. We first describe steps for optimization of genotyping primers, followed by detailed guidance on the preparation of both scATAC-seq and single-cell genotyping libraries, fully automated on high-throughput liquid handling platforms.

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