Top-Down, Knowledge-Based Genetic Reduction of Yeast Central Carbon Metabolism.

Saccharomyces cerevisiae, whose evolutionary past includes a whole-genome duplication event, is characterized by a mosaic genome configuration with substantial apparent genetic redundancy. This apparent redundancy raises questions about the evolutionary driving force for genomic fixation of "minor" paralogs and complicates modular and combinatorial metabolic engineering strategies. While isoenzymes might be important in specific environments, they could be dispensable in controlled laboratory or industrial contexts.

Stress-induced expression is enriched for evolutionarily young genes in diverse budding yeasts.

The Saccharomycotina subphylum (budding yeasts) spans 400 million years of evolution and includes species that thrive in diverse environments. To study niche-adaptation, we identify changes in gene expression in three divergent yeasts grown in the presence of various stressors. Duplicated and non-conserved genes are significantly more likely to respond to stress than genes that are conserved as single-copy orthologs.

Connecting central carbon and aromatic amino acid metabolisms to improve de novo 2-phenylethanol production in Saccharomyces cerevisiae.

The organic compound 2-phenylethanol (2PE) has a pleasant floral scent and is intensively used in the cosmetic and food industries. Microbial production of 2PE by phenylalanine bioconversion or de novo biosynthesis from sugar offer sustainable, reliable and natural production processes compared to chemical synthesis. Despite the ability of Saccharomyces cerevisiae to naturally synthesize 2PE, de novo synthesis in high concentration and yield remains a metabolic engineering challenge.

Engineering de novo anthocyanin production in Saccharomyces cerevisiae.

Background: Anthocyanins are polyphenolic pigments which provide pink to blue colours in fruits and flowers. There is an increasing demand for anthocyanins, as food colorants and as health-promoting substances. Plant production of anthocyanins is often seasonal and cannot always meet demand due to low productivity and the complexity of the plant extracts.

CRISPR-Cas9 mediated gene deletions in lager yeast Saccharomyces pastorianus.

Background: The ease of use of CRISPR-Cas9 reprogramming, its high efficacy, and its multiplexing capabilities have brought this technology at the forefront of genome editing techniques. Saccharomyces pastorianus is an aneuploid interspecific hybrid of Saccharomyces cerevisiae and Saccharomyces eubayanus that has been domesticated for centuries and is used for the industrial fermentation of lager beer. For yet uncharacterised reasons, this hybrid yeast is far more resilient to genetic alteration than its ancestor S.

A metamolecule antenna for coplanar waveguides.

We report on a metamolecule antenna, based on a fish-scale design but augmented with two split-ring resonators (SRRs) placed within the fish-scale loops. The properties of the antenna resonator, with and without additional SRRs, were examined using finite element method simulations (COMSOL Multiphysics). The simulation findings were subsequently confirmed experimentally, using a vector network analyser coupled to an antenna-loaded coplanar waveguide (CPW).

Ultrafast optical parametric pumping of magnetization reorientation and precessional dynamics in DyFe2/YFe2 exchange springs.

The magnetization dynamics of a wound [DyFe(2)(20  Å)/YFe(2)(80  Å)](×40) exchange spring multilayer have been explored in optical pump probe experiments. Ultrafast optical heating was used to modify the magnetic parameters of the multilayer, while the time resolved magneto-optical Kerr effect was used to probe its response. Although the probe signal is dominated by precession and winding of the exchange spring within the soft YFe(2) layer, reorientation of the DyFe(2) hard-layer magnetization is detected on time scales less than 100 ps.

Modulating sub-THz radiation with current in superconducting metamaterial.

We show that subterahertz transmission of the superconducting metamaterial, an interlinked two-dimensional network of subwavelength resonators connected by a continuous superconducting wire loop, can be dynamically modulated by passing electrical current through it. We have identified the main mechanisms of modulation that correspond to the suppression of the superconductivity in the network by magnetic field and heat dissipation. Using the metamaterial fabricated from thin niobium film, we were able to demonstrate a transmission modulation depth of up to 45% and a bandwidth of at least 100 kHz.

Switching the in-plane easy axis by ion implantation in rare earth based magnetic films.

Ar(+) ions have been implanted into Laves phase epitaxial thin films of YFe(2) and DyFe(2). Magneto-optical Kerr effect and vibrating sample magnetometry experiments show that the easy and hard axes of magnetization in both materials rotate through an in-plane angle of 90°, whilst the strength of the magnetic anisotropy remains unaltered. This is supported by OOMMF computational modelling.

Flux exclusion superconducting quantum metamaterial: towards quantum-level switching.

Nonlinear and switchable metamaterials achieved by artificial structuring on the subwavelength scale have become a central topic in photonics research. Switching with only a few quanta of excitation per metamolecule, metamaterial's elementary building block, is the ultimate goal, achieving which will open new opportunities for energy efficient signal handling and quantum information processing. Recently, arrays of Josephson junction devices have been proposed as a possible solution.

Some comments on the magnetic moments used in REFe2 exchange spring micro-magnetic simulations.

The current status of magnetic moments used in micro-magnetic modelling of the Laves phase rare earth iron REFe(2) inter-metallic compounds is reviewed. In particular, it is argued that both the neutron scattering results and band structure calculations provide little support for the long-held view that the Fe 3d moments are constant across the REFe(2) series, and for the oft-used rule of thumb that the (57)Fe hyperfine field is proportional to the Fe magnetic moment. Nevertheless, it is argued that it is acceptable to employ a simple ferrimagnetic model, in which the free-ion moment is ascribed to the RE ion and a moment of μ(d) = μ(3d) + μ(5d)≈1.

Magnetic anisotropy terms in [110] MBE-grown REFe(2) films involving the strain term ε(xy).

The magnetic anisotropy parameters in [110] MBE-grown films of REFe(2) (RE, rare earth) compounds are not the same as those in the bulk. This is due to the presence of a shear strain ε(xy), frozen-in during crystal growth. In this paper, magnetic anisotropy parameters for [110] MBE-grown REFe(2) films, that directly involve the shear strain ε(xy), are presented and discussed.

Symmetry locking and commensurate vortex domain formation in periodic pinning arrays.

The spontaneous formation of domains of commensurate vortex patterns near rational fractional matching fields of a periodic pinning array has been investigated with high resolution scanning Hall probe microscopy. We show that domain formation is promoted due to the efficient incorporation of mismatched excess vortices and vacancies at the corners of domain walls, which outweighs the energetic cost of creating them. Molecular dynamics simulations with a generic pinning potential reveal that domains are formed only when vortex-vortex interactions are long range.

D3 dopamine receptor mRNA expression in lymphocytes: a peripheral marker for schizophrenia?

Background: Identification of schizophrenia, a common neuropsychiatric disorder, is based on clinical examination. An easily measurable peripheral marker, which may enable a more rapid and more accurate diagnosis, is not available. A possible candidate is the D3 dopamine receptor on lymphocytes.

History effects and phase diagram near the lower critical point in YBa2Cu3O7 single crystals.

Using a sensitive torque magnetometer we have studied magnetization curves for untwinned overdoped YBa2Cu3O7 single crystals in fields of up to 28 T. We demonstrate the existence of history effects below the lower critical point and provide a full demarcation of the Bragg-glass phase. A pronounced symmetry is observed in the behavior of the phase lines, irreversible magnetization, and value of the magnetization jump near both critical points.

Oscillatory melting temperature of the vortex smectic phase in layered superconductors.

We report on transport measurements of YBa 2Cu 3O (7-delta) single crystals with different oxygen contents in the geometry B, J ||ab (J perpendicularB). Our data show that the vortices become confined between the Cu-O planes below a well-defined temperature at which the effective size 2xi of the vortex core is approximately equal to the period of the Cu-O layers. This confinement strongly increases the vortex liquid freezing temperature.

Detection of antibodies to Salmonella enteritidis in sera and yolks from experimentally and naturally infected chickens.

An indirect enzyme-linked immunosorbent assay (ELISA) based on the lipopolysaccharide (LPS) of Salmonella enteritidis phage type 4, was developed for the detection of antibodies to salmonella. Sera and yolks from chickens infected experimentally with S enteritidis showed strong positive reactions. Cross-reactions occurred with sera from chickens inoculated with S typhimurium or S gallinarum.

[Consensus depression in adults. Dutch Association for Psychiatry].

Depression is a frequent and treatable disorder, but it is insufficiently recognized. A generally used classification system is lacking. In a consensus meeting the following terms were defined: a normal feeling of depression, depression as a symptom and depression as an illness.